1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TGCAGCTGTGGTGGAAAAAAAGATAGCTGATGCGAAGTCACAAGGGAAGGAAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATGgtaaatgcttgagcgtatctaataaactatatacctgtttggaactatgcacagtgtagcccgggtagccattcagttgtttccgtgaaagatggaggtt...
species | Zea mays |
transcript | GRMZM2G155314_T02 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATG GTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGCEST: gi|78118020|gb|DV536407.1|DV536407
genomic: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATGgtaaatgctt ... ggaaatgcagGTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGC
EST: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATG GTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGCEST: gi|5456056|gb|AI833746.1|AI833746
genomic: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATGgtaaatgctt ... ggaaatgcagGTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGC
EST: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATG GTACTAGAGAACGACCTTGATGCTACCGCGTTTGCCAACCGGAGCCTATGCEST: gi|78027423|gb|DV495810.1|DV495810
genomic: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATGgtaaatgctt ... ggaaatgcagGTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGC
EST: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATG GTACTAGAGAACGACCTTGATGCTACCGCGTTTGCCAACCGGAGCCTATGCEST: gi|78083173|gb|DV511566.1|DV511566
genomic: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATGgtaaatgctt ... ggaaatgcagGTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGC
EST: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATG GTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGCEST: gi|78107759|gb|DV526177.1|DV526177
genomic: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATGgtaaatgctt ... ggaaatgcagGTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGC
EST: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATG GTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGCEST: gi|74242115|gb|DT650029.1|DT650029
genomic: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATGgtaaatgctt ... ggaaatgcagGTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGC
EST: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATG GTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGC
genomic: AAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATGgtaaatgctt ... ggaaatgcagGTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTGTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCAGCTGTGGTGGAAAAAAAGATAGCTGATGCGAAGTCACAAGGGAAGGAAGCTTTCGCAAGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATGgtaaatgcttgagcgtatctaataaactatatacctgtttggaactatgcacagtgtagcccgggtagccattcagttgtttccgtgaaagatggaggtt
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