1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ATTCAATGTCTGTTTGGAACCTATTAAGAGAGTTCCGGATCAGGCAGGTTCATATGGCAGTGGTCCTCAATGAATATGGTGGAACTATTGGTgtatgtcccaatgaaacccaatttctatactttatgtgtttacaaactggacacagttcagtacttgttaatgattctagttatgtatttcatccaagga...
species | Zea mays |
transcript | GRMZM2G153928_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GGCAGGTTCATATGGCAGTGGTCCTCAATGAATATGGTGGAACTATTGGT ATTGTAACACTAGAAGACGTAGTGGAAGAAATAGTTGGTGAAATCTTCGATEST: gi|26558918|gb|CA831153.1|CA831153
genomic: GGCAGGTTCATATGGCAGTGGTCCTCAATGAATATGGTGGAACTATTGGTgtatgtccca ... aaaaatgcagATT-TAACATTAGAAGACGTAGTGGAAGAAATAGTTGGTGAAATCTTCGAT
EST: GGCAGGTTCATATGGCAGTGGTCCTCAATGAATATGGTGGAACTATTGGT ATTGTAACACTAGAAGACGTAGTGGAAGAAATAGTTGGTGAAATCTTCGATEST: gi|22473287|gb|BU037767.1|BU037767
genomic: GGCAGGTTCATATGGCAGTGGTCCTCAATGAATATGGTGGAACTATTGGTgtatgtccca ... aaaaatgcagATT-TAACATTAGAAGACGTAGTGGAAGAAATAGTTGGTGAAATCTTCGAT
EST: GGCAGGTTCATATGGCAGTGGTCCTCAATGAATATGGTGGAACTATTGGT ATTGTAACACTAGAAGACGTAGTGTAAGAAATAGTTGGTGAAATCTTCGATEST: gi|31356399|gb|CD440756.1|CD440756
genomic: GGCAGGTTCATATGGCAGTGGTCCTCAATGAATATGGTGGAACTATTGGTgtatgtccca ... aaaaatgcagATT-TAACATTAGAAGACGTAGTGGAAGAAATAGTTGGTGAAATCTTCGAT
EST: GGCAGGTTCATATGGCAGTGGTCCTCAATGAATATGGTGGAACTATTGGT ATTGTAACACTAGAAGACGTAGTGGAAGAAATAGTTGGTGAAATCTTCGAT
genomic: GGCAGGTTCATATGGCAGTGGTCCTCAATGAATATGGTGGAACTATTGGTgtatgtccca ... aaaaatgcagATT-TAACATTAGAAGACGTAGTGGAAGAAATAGTTGGTGAAATCTTCGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTCAATGTCTGTTTGGAACCTATTAAGAGAGTTCCGGATCAGGCAGGTTCATATGGCAGTGGTCCTCAATGAATATGGTGGAACTATTGGTgtatgtcccaatgaaacccaatttctatactttatgtgtttacaaactggacacagttcagtacttgttaatgattctagttatgtatttcatccaagga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA