Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|78179621|gb|DV549994.1|DV549994EST: CTGTATTAAGGGTGGCTGCAACTGGACATGACAAGAAGCTGTTTTTCAAG GTGGTTTCTACATTGTATTTTCTAGCAGCTTTGGGAAGGGTGGTGTCAGGC
genomic: CTGTATTAAGGGTGGCTGCAACTGGACATGACAAGAAGCTGTTTTTCAAGgtaggctctc ... aacgttgcagGTGGTTTCTACATTGTATTTTCTAGCAGCTTTGGGAAGGGTGGTGTCAGGC
EST:
gi|6973446|gb|AW438140.1|AW438140EST: CTGTATTAAGGGTGGCTGCAACTGGACATGACAAGAAGCTGTTTTTCAAG GTGGTTTCTACATTGTATTTTCTAGCAGCTTTGGGAAGGGTGGTGTCAGGC
genomic: CTGTATTAAGGGTGGCTGCAACTGGACATGACAAGAAGCTGTTTTTCAAGgtaggctctc ... aacgttgcagGTGGTTTCTACATTGTATTTTCTAGCAGCTTTGGGAAGGGTGGTGTCAGGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGCAAATAGCATAGTTGCATCTTTAGCCAATACAGTAGGAGCTGCTGAGTCTGTATTAAGGGTGGCTGCAACTGGACATGACAAGAAGCTGTTTTTCAAGgtaggctctcaaaagtttgactttatatgttgtccctaagggttgagacaaaagaaaaaatgttgagattctattatattctgatgcttgttaaacctat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT