1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACAGGAAGTTTGGTAAAGGGAAGGATAAGATCGACGATGAGGACATCACCTTCCAGCGCATGGTTGCAAAGgttagaccgaatcgtcatgcaacgtctgttccggcttactgttttgttgtactgcatacatgtatgctcgttttaggattttttctggattaaatgtagg...
species | Zea mays |
transcript | GRMZM2G146786_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGGATAAGATCGACGATGAGGACATCACCTTCCAGCGCATGGTTGCAAAG GGATTTTGGTTCTCTACTCGGTGGTTGATACCAACAGATGCAAGAGGTTGCEST: gi|28187790|gb|CB179400.1|CB179400
genomic: AGGATAAGATCGACGATGAGGACATCACCTTCCAGCGCATGGTTGCAAAGgttagaccga ... gccctgacagGGATTTTGGTTCTCTACTCGGTGGTTGATACCAACAGATGCAAGAGGTTGC
EST: ANGATAAGATCGACGATGAGGACATCACCTTCCAGCGCATGGTTGCAAAG GGATTTTGGTTCTCTACTCGGTGGTTGATACCAACAGATGCAAGAGGTTGCEST: gi|211486969|gb|FL249576.1|FL249576
genomic: AGGATAAGATCGACGATGAGGACATCACCTTCCAGCGCATGGTTGCAAAGgttagaccga ... gccctgacagGGATTTTGGTTCTCTACTCGGTGGTTGATACCAACAGATGCAAGAGGTTGC
EST: AGGATAAGATCGACGATGAGGACATCACCTTCCAGCGCATGGTTGCAAAG GGATTTTGGTTCTCTACTCGGTGGTTGATACCAACAGATGCAAGAGGTTGC
genomic: AGGATAAGATCGACGATGAGGACATCACCTTCCAGCGCATGGTTGCAAAGgttagaccga ... gccctgacagGGATTTTGGTTCTCTACTCGGTGGTTGATACCAACAGATGCAAGAGGTTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAGGAAGTTTGGTAAAGGGAAGGATAAGATCGACGATGAGGACATCACCTTCCAGCGCATGGTTGCAAAGgttagaccgaatcgtcatgcaacgtctgttccggcttactgttttgttgtactgcatacatgtatgctcgttttaggattttttctggattaaatgtagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG