1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TCATCTGTTCTTCATTCCCAGCCGAAGTCCACTGTTGGAACACCTGCTTATATTGCACCTGAAGTTTTGTTGAAAAAAGAATATGATGGCAAGgtacttgtgctatcactttttttatcttgagaaatgtgtcttgagagttgtgcatacctctgcatcagtgcactgttgttccatatacatgtgccacatg...
species | Zea mays |
transcript | GRMZM2G138861_T03 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTGCTTATATTGCACCTGAAGTTTTGTTGAAAAAAGAATATGATGGCAAG ATTGCTGACGTTTGGTCATGTGGTGTAACCCTCTATGTAATGGTTGTTGGCEST: gi|166683751|gb|EG304308.1|EG304308
genomic: CTGCTTATATTGCACCTGAAGTTTTGTTGAAAAAAGAATATGATGGCAAGgtacttgtgc ... gacaaaacagATTGCTGACGTTTGGTCATGTGGTGTAACCCTCTATGTAATGGTTGTTGGC
EST: GTTTTGTTGAAAAAAGAATATGATGGCAAG ATTGCTGACGTTTGGTCATGTGGTGTAACCCTCTATGTAATGGTTGTTGGC
genomic: GTTTTGTTGAAAAAAGAATATGATGGCAAGgtacttgtgc ... gacaaaacagATTGCTGACGTTTGGTCATGTGGTGTAACCCTCTATGTAATGGTTGTTGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCATCTGTTCTTCATTCCCAGCCGAAGTCCACTGTTGGAACACCTGCTTATATTGCACCTGAAGTTTTGTTGAAAAAAGAATATGATGGCAAGgtacttgtgctatcactttttttatcttgagaaatgtgtcttgagagttgtgcatacctctgcatcagtgcactgttgttccatatacatgtgccacatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA