1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' |
gtatagtctagctccatttatttaaattatggttcattgctaagtgtaatttgtaatgcagaagttgattgaaagattttggtaaacagGTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGTCGCCCCACCTCGCGCAGCAGTCCAGCCACAGTTGCCTACTACAGCACCT
species | Zea mays |
transcript | GRMZM2G137236_T01 |
intron # | 26 |
splice site | 3' |
intron type | U2 |
EST: ACCCNTCTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGA GTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGTEST: gi|211430870|gb|FL250418.1|FL250418
genomic: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGAgtatagtcta ... tggtaaacagGTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGT
EST: CCCAACTGCGGCTAACAGTTGCCTCGGAGCGAC-AATATTTGACATTCGA AEST: gi|211430870|gb|FL250418.1|FL250418
genomic: CCCAACTGCGGCTAACAGTTGCCTCGG-GCGACCAATATTTGACATTCGAgtatagtcta ... tggtaaacag-
EST: CCCAACTGCGGCTAACAGTTGCCTCGGAGCGAC-AATATTTGACATTCGA AEST: gi|32799873|gb|CD952109.1|CD952109
genomic: CCCAACTGCGGCTAACAGTTGCCTCGG-GCGACCAATATTTGACATTCGAgtatagtcta ... tggtaaacag-
EST: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGA GTTGAAAGAGTTCATCAAGGAACATCTGGTTGATATCCCAAGGACTCAGGTEST: gi|37395386|gb|CF634973.1|CF634973
genomic: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGAgtatagtcta ... tggtaaacagGTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGT
EST: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGA GTTGAAAGAGTTCATCAAGGAACATCTGGTTGATATCCCAAGGACTCAGGTEST: gi|211396401|gb|FL438169.1|FL438169
genomic: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGAgtatagtcta ... tggtaaacagGTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGT
EST: CTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGA GTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGTEST: gi|113704027|gb|EE681531.1|EE681531
genomic: CTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGAgtatagtcta ... tggtaaacagGTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGT
EST: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGA GTTGAAAGAGTTCATCAAGGAACATCTGGTTGATATCCCAAGGACTCAGGTEST: gi|67018440|gb|CO447189.1|CO447189
genomic: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGAgtatagtcta ... tggtaaacagGTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGT
EST: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGA GTTGAAAGAGTTCATCAAGGAACATCTGGTTGATATCCCAAGGACTCAGGTEST: gi|60341139|gb|DN208112.1|DN208112
genomic: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGAgtatagtcta ... tggtaaacagGTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGT
EST: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGA GTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGTEST: gi|211430871|gb|FL250419.1|FL250419
genomic: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGAgtatagtcta ... tggtaaacagGTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGT
EST: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGAACAATATTTGACATTCAA GTTGAAAGA-TTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAAGTEST: gi|213169610|gb|FM186192.1|FM186192
genomic: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGAgtatagtcta ... tggtaaacagGTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGT
EST: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGA GTTGAAAGAGTTCATCAAGGAACATCTGGTTGATATCCCAAGGACTCAGGT
genomic: ACCCAACTGCGGCTAACAGTTGCCTCGGGCGACCAATATTTGACATTCGAgtatagtcta ... tggtaaacagGTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGT
cattgctaagtgtaatttgtaatgcagaagttgattgaaagattttggtaaacagGTTGAAAGAGTTCATCAAAGAACATCTGGTTGATATCCCAAGGACTCAGGTCGCCCCACCTCGCGCAGCAGTCCAGCCACAGTTGCCTACTACAGCACCT
agttgat putative branch site (score: 68)
taatttgtaat TA-rich tract