1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CAATCGTCTTCGACCCTCAATTGATGAAAGTGATTGCAAATACAAAAGATTATTTGGCTGCTATGTTGCTCGTGAGGCTGTGATCGATGAGGAATACTGGgtaataaacttgttaagttgttagagcatattgttcatttgttctgttttgcagacataacttccacatgtacttgtgatgaactgcttgctaactattg...
species | Zea mays |
transcript | GRMZM2G136389_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TATTTGGCTGCTATGTTGCTCGTGAGGCTGTGATCGATGAGGAATACTGG ATCGCTGCATGGTTGAGAGCAGAAGATCAGTATGAAAATGAGTCAGGCAATEST: gi|71438179|gb|DR819229.1|DR819229
genomic: TATTTGGCTGCTATGTTGCTCGTGAGGCTGTGATCGATGAGGAATACTGGgtaataaact ... tgattgatagATCGCTGCATGGTTGAGAGCAGAAGATCAGTATGAAAATGAGTCAGGCAAT
EST: TATTTGGCTGCTATGTTGCTCGTGAGGCTGTGATCGATGAGGAATACTGG ATCGCTGCATGGTTGAGAGCAGAAGATCAGTATGAAAATGAGTCAGGCAATEST: gi|91878484|gb|EB408441.1|EB408441
genomic: TATTTGGCTGCTATGTTGCTCGTGAGGCTGTGATCGATGAGGAATACTGGgtaataaact ... tgattgatagATCGCTGCATGGTTGAGAGCAGAAGATCAGTATGAAAATGAGTCAGGCAAT
EST: TATTTGGCTGCTATGTTGCTCGTGAGGCTGTAATCGATGAGGAATACTGG ATCGCTGCATGGTTGAGAGCAGAAGATCAGTATGAAAATGAGTCAGGCAAT
genomic: TATTTGGCTGCTATGTTGCTCGTGAGGCTGTGATCGATGAGGAATACTGGgtaataaact ... tgattgatagATCGCTGCATGGTTGAGAGCAGAAGATCAGTATGAAAATGAGTCAGGCAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAATCGTCTTCGACCCTCAATTGATGAAAGTGATTGCAAATACAAAAGATTATTTGGCTGCTATGTTGCTCGTGAGGCTGTGATCGATGAGGAATACTGGgtaataaacttgttaagttgttagagcatattgttcatttgttctgttttgcagacataacttccacatgtacttgtgatgaactgcttgctaactattg
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