1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACCGGCTGCTGCATCCGCCTCTGGCCCGTCGGGACATGCCCTCCGCCGCCGCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtctctttctctcctgtcacctggatactcactcgcattgtgctttctttgctgtcttgctcgcgtggtagatgggatttgctcctctaagtga...
species | Zea mays |
transcript | GRMZM2G132184_T03 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG AGAAGTCAACAGAAAATGGTAGTAGGAATCAACCGGGGGGCATTGGTAGTCEST: gi|211069314|gb|FL193613.1|FL193613
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcagAGAAGTCAACAGAAAATGGTAGTAGGAATCAACCGGTGG-CATTGGTAGTC
EST: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG AAGA-GTCAACNAGTAA-TGGTAGTAGGAATCAEST: gi|76934438|gb|DV173883.1|DV173883
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcagA-GAAGTCAAC-AGAAAATGGTAGTAGGAATCA
EST: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG CEST: gi|76934438|gb|DV173883.1|DV173883
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
EST: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG CEST: gi|89762820|gb|DY690260.1|DY690260
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
EST: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG AGAAGTCCACAGAAAATGGTAGTAGGAATCAACCGGGTGGCATTGGTAGTCEST: gi|211069315|gb|FL193614.1|FL193614
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcagAGAAGTCAACAGAAAATGGTAGTAGGAATCAACCGG-TGGCATTGGTAGTC
EST: GCAGAGGTCCAAGGTCGACACCTCCAC-AGCAGCGCCAGCACGCACGGGG AGAAGTCAACAGAAAATGGTAGTAGGAATCAACCGGTGGGCATTGGTAGTCEST: gi|211072047|gb|FL193622.1|FL193622
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcagAGAAGTCAACAGAAAATGGTAGTAGGAATCAACCGGTGG-CATTGGTAGTC
EST: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG GEST: gi|211072047|gb|FL193622.1|FL193622
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
EST: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG GEST: gi|149104047|gb|EE289479.2|EE289479
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
EST: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG CEST: gi|149104047|gb|EE289479.2|EE289479
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
EST: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG CEST: gi|148930993|gb|EC873532.2|EC873532
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
EST: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG CEST: gi|148930993|gb|EC873532.2|EC873532
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
EST: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG CEST: gi|76916337|gb|DV166341.1|DV166341
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
EST: GCAGAGGTCCA-GGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG CEST: gi|76916337|gb|DV166341.1|DV166341
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
EST: GCAGAGGTCCA-GGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGG CEST: gi|71441100|gb|DR822150.1|DR822150
genomic: GCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
EST: CAGAGGTCCAAGGTCGACACCTCCCAC-AGCAGCGCCAGCACGCACGGGG CEST: gi|71441100|gb|DR822150.1|DR822150
genomic: CAGAGGTCCAAGGTCGACACCTCC-ACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
EST: CAGAGGTCCAAGGTCGACACCTCCCAC-AGCAGCGCCAGCACGCACGGGG C
genomic: CAGAGGTCCAAGGTCGACACCTCC-ACCAGCAGCGCCAGCACGCACGGGGgtagacgtct ... gtaacagcag-
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCGGCTGCTGCATCCGCCTCTGGCCCGTCGGGACATGCCCTCCGCCGCCGCAGAGGTCCAAGGTCGACACCTCCACCAGCAGCGCCAGCACGCACGGGGgtagacgtctctttctctcctgtcacctggatactcactcgcattgtgctttctttgctgtcttgctcgcgtggtagatgggatttgctcctctaagtga
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