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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCCGTCCTGGAAGCCTTCGACGAGCTGGGGCTCAGCGTCCTCCAGGCCACCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAGgtaaattaatactactactacttactagctagtagctagtccatcgtcagttgctgcttgcactgcttgctcgtcgatcgaggattaattcttgacaagctaattaataatataatactacacgacaacaatacaattctctctcattctatctttctctgttgcattgttggtctgtgcctgcacgcag

Basic information

species Zea mays
transcript GRMZM2G124567_T03
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|74246352|gb|DT654266.1|DT654266
EST:     CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAG                         AACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
genomic: CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAGgtaaattaat ... ctgcacgcagAACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
EST: gi|211389355|gb|FL471371.1|FL471371
EST:     CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAG                         AACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
genomic: CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAGgtaaattaat ... ctgcacgcagAACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
EST: gi|71757884|gb|DR955821.1|DR955821
EST:     CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAG                         AACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
genomic: CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAGgtaaattaat ... ctgcacgcagAACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
EST: gi|71306651|gb|DR789485.1|DR789485
EST:     CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAG                         AACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
genomic: CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAGgtaaattaat ... ctgcacgcagAACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
EST: gi|78087746|gb|DV516139.1|DV516139
EST:     CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAG                         AACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
genomic: CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAGgtaaattaat ... ctgcacgcagAACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
EST: gi|16916338|gb|BM072801.1|BM072801
EST:     CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAG                         AACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
genomic: CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAGgtaaattaat ... ctgcacgcagAACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
EST: gi|71436516|gb|DR817566.1|DR817566
EST:     CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAG                         AACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
genomic: CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAGgtaaattaat ... ctgcacgcagAACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
EST: gi|91878989|gb|EB408946.1|EB408946
EST:     CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAG                         AACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG
genomic: CCGCGTCCTGCGCGGCCGACTCCTTCCGCCTCGAGGCTGTGGGCGGGGAGgtaaattaat ... ctgcacgcagAACGTGGTGGACAACGTGGACGAGCACGTCGTGAAGCAGGCCGTCCTGCAG