Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|74246352|gb|DT654266.1|DT654266EST: TTGCCTGCGCGCAGGACGCCCTGAGACACAAGTCCTCCTCCTATCCGACG GTGACCGTGGAAACCCTAGGAGTGCAGGGGTTCCTCGTCAACGTGTTCTCC
genomic: TTGCCTGCGCGCAGGACGCCCTGAGACACAAGTCCTCCTCCTATCCGACGgtatatataa ... atggatgcagGTGACCGTGGAAACCCTAGGAGTGCAGGGGTTCCTCGTCAACGTGTTCTCC
EST:
gi|211389355|gb|FL471371.1|FL471371EST: TTGCCTGCGCGCAGGACGCCCTGAGACACAAGTCCTCCTCCTATCCGACG GTGACCGTGGAAACCCTAGGAGTGCAGGGGTTCCTCGTCAACGTGTTCTCC
genomic: TTGCCTGCGCGCAGGACGCCCTGAGACACAAGTCCTCCTCCTATCCGACGgtatatataa ... atggatgcagGTGACCGTGGAAACCCTAGGAGTGCAGGGGTTCCTCGTCAACGTGTTCTCC
EST:
gi|71306651|gb|DR789485.1|DR789485EST: TTGCCTGCGCGCAGGACGCCCTGAGACACAAGTCCTCCTCCTATCCGACG GTGACCGTGGAAACCCTAGGAGTGCAGGGGTTCCTCGTCAACGTGTTCTCC
genomic: TTGCCTGCGCGCAGGACGCCCTGAGACACAAGTCCTCCTCCTATCCGACGgtatatataa ... atggatgcagGTGACCGTGGAAACCCTAGGAGTGCAGGGGTTCCTCGTCAACGTGTTCTCC
EST:
gi|78087746|gb|DV516139.1|DV516139EST: TTGCCTGCGCGCAGGACGCCCTGAGACACAAGTCCTCCTCCTATCCGACG GTGACCGTGGAAACCCTAGGAGTGCAGGGGTTCCTCGTCAACGTGTTCTCC
genomic: TTGCCTGCGCGCAGGACGCCCTGAGACACAAGTCCTCCTCCTATCCGACGgtatatataa ... atggatgcagGTGACCGTGGAAACCCTAGGAGTGCAGGGGTTCCTCGTCAACGTGTTCTCC
EST:
gi|16916338|gb|BM072801.1|BM072801EST: TTGCTTGCGCGCAGGACGCCCTGAGACACAAGTCCTCCTCCTATCCGACG GTGACCGTGGAAACCCTAGGAGTGCAGGGGTTCCTCGTCAACGTGTTCTCC
genomic: TTGCCTGCGCGCAGGACGCCCTGAGACACAAGTCCTCCTCCTATCCGACGgtatatataa ... atggatgcagGTGACCGTGGAAACCCTAGGAGTGCAGGGGTTCCTCGTCAACGTGTTCTCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGCGTACATCAAGCAGCTGCAGCAGAAGGTGGTGAGGCTGAACCAGGAGATTGCCTGCGCGCAGGACGCCCTGAGACACAAGTCCTCCTCCTATCCGACGgtatatataatctcatcgcatatgcagattttgccacacgtagagagaccgacagcgtgttgttgattgacgatgaaataaacgggccggccgtcggcggatatgtatatgctatggatgcag
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