1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGGATCAGATGAGGCCATCAGGGAGCTGAGGTCGCTGGGCATCAAGTCAGTGATGCTTACTGGGGATAGTTCTGCAGCAGCTTCATATGCACAGAACCAGgtaagaaaagaaaaacacatggcagtgttggtgctgtgcacttttatcatttctatacagtatggcagcttataataccgcggcttgtcttctgtcttctggcag
species | Zea mays |
transcript | GRMZM2G099191_T03 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGATGCTTACTGGGGATAGTTCTGCAGCAGCTTCATATGCACAGAACCAG CTTGGGAACATACTTGATGAGGTTCACTCTGAGCTTCTTCCEST: gi|211246862|gb|FL362251.1|FL362251
genomic: TGATGCTTACTGGGGATAGTTCTGCAGCAGCTTCATATGCACAGAACCAGgtaagaaaag ... cttctggcagCTTGGGAACATACTTGATGAGGTTCACTCTGAGCTTCTTCC
EST: TGATGCTTACTGGGGATAGTTCTGCAGCAGCTTCATATGCACAGAACCAG CTTGGGAACATACTTGATGAGGTTCACTCTGAGCTTCTTCCAGAGGACAAG
genomic: TGATGCTTACTGGGGATAGTTCTGCAGCAGCTTCATATGCACAGAACCAGgtaagaaaag ... cttctggcagCTTGGGAACATACTTGATGAGGTTCACTCTGAGCTTCTTCCAGAGGACAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGATCAGATGAGGCCATCAGGGAGCTGAGGTCGCTGGGCATCAAGTCAGTGATGCTTACTGGGGATAGTTCTGCAGCAGCTTCATATGCACAGAACCAGgtaagaaaagaaaaacacatggcagtgttggtgctgtgcacttttatcatttctatacagtatggcagcttataataccgcggcttgtcttctgtcttctggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT