1 5' 3' | 2 5' 3' | 3 5' 3' |
AGCTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAGgtgcacttccttatttgagctaaaaaatgtgccattgtcttatgttttgaccgataataattttgagctttgatatttgcagttcattttccctgttata...
species | Zea mays |
transcript | GRMZM2G093535_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAG GGAGGAGCTTGAGAAACAAAAAGCTCAGGAACGTTATATGAAACTTCAGGAEST: gi|211213892|gb|FL469120.1|FL469120
genomic: CTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAGgtgcacttcc ... cgttctgtagGGAGGAGCTTGAGAAACAAAAAGCTCATGAACGTTATATGAAACTTCAGGA
EST: CTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAG GGAGGAGCTTGAGAAACAAAAAGCTCATGAACGTTATATGAAACTTCAGGAEST: gi|32837519|gb|CD977197.1|CD977197
genomic: CTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAGgtgcacttcc ... cgttctgtagGGAGGAGCTTGAGAAACAAAAAGCTCATGAACGTTATATGAAACTTCAGGA
EST: CTTGGAAAGACAACTGAACTCTCAAGGCGTTAAAG GGAGGAGCTTGAGAAACAAAAAGCTCATGAACGTTATATGGAACTTCAGGAEST: gi|211273115|gb|FL373254.1|FL373254
genomic: CTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAGgtgcacttcc ... cgttctgtagGGAGGAGCTTGAGAAACAAAAAGCTCATGAACGTTATATGAAACTTCAGGA
EST: CTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAG GGAGGAGCTTGAGAAACAAAAAGCTCAGGAACGTTATATGAAACTTCAGGAEST: gi|32937462|gb|CF042281.1|CF042281
genomic: CTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAGgtgcacttcc ... cgttctgtagGGAGGAGCTTGAGAAACAAAAAGCTCATGAACGTTATATGAAACTTCAGGA
EST: CTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAG GGAGGAGCTTGAGAAACAAAAAGCTCATGAACGTTATATGAAACTTCAGGAEST: gi|32944737|gb|CF049556.1|CF049556
genomic: CTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAGgtgcacttcc ... cgttctgtagGGAGGAGCTTGAGAAACAAAAAGCTCATGAACGTTATATGAAACTTCAGGA
EST: CTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAG GGAGGAGCTTGAGAAACAAAAAGCTCATGAACGTTATATGAAACTTCAGGA
genomic: CTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAGgtgcacttcc ... cgttctgtagGGAGGAGCTTGAGAAACAAAAAGCTCATGAACGTTATATGAAACTTCAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCTTGGAAAGACAACTGAACTCTCAAGGCGTGAAAGgtgcacttccttatttgagctaaaaaatgtgccattgtcttatgttttgaccgataataattttgagctttgatatttgcagttcattttccctgttata
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