1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...agccacctgatcgaccatcaatttttattctgcgattcaatcaatgaatcaatgttccaacattttatatatatgtactaattttctattttcttttcagTTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGATCCATTGGAAACCTGGTTGTGTATGAATGGGTTTCCAGCTACTTCTATTC
species | Zea mays |
transcript | GRMZM2G085916_T02 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAG TTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGATEST: gi|12968748|gb|BG265694.1|BG265694
genomic: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAGgtaaaaaatg ... ttcttttcagTTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGAT
EST: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAG TTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGATEST: gi|5871680|gb|AW018151.1|AW018151
genomic: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAGgtaaaaaatg ... ttcttttcagTTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGAT
EST: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAG TTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGATEST: gi|32942143|gb|CF046962.1|CF046962
genomic: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAGgtaaaaaatg ... ttcttttcagTTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGAT
EST: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAG TTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGATEST: gi|78084502|gb|DV512895.1|DV512895
genomic: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAGgtaaaaaatg ... ttcttttcagTTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGAT
EST: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAG TTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGATEST: gi|32846870|gb|CD986551.1|CD986551
genomic: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAGgtaaaaaatg ... ttcttttcagTTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGAT
EST: TAAATCCGCACTATCATTTCCTCAACGGAGTTAGCGATGCATCGTCTCAG TTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGATEST: gi|32845897|gb|CD985578.1|CD985578
genomic: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAGgtaaaaaatg ... ttcttttcagTTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGAT
EST: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAG TTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGATEST: gi|6056473|gb|AW090863.1|AW090863
genomic: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAGgtaaaaaatg ... ttcttttcagTTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGAT
EST: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAG TTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGAT
genomic: TAAATCCGCAGTATCATTTCCTCAACGGTGTTAGCGATGCATCGTCTCAGgtaaaaaatg ... ttcttttcagTTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGAT
gaatcaatgttccaacattttatatatatgtactaattttctattttcttttcagTTGCAGCTAATTTGATGCTTGTGTTTATGGAAACCAAGAGGTGGCGCTGATCCATTGGAAACCTGGTTGTGTATGAATGGGTTTCCAGCTACTTCTATTC
tactaat putative branch site (score: 22)
ctaattttctattttc CT-rich tract
aacattttatatatat TA-rich tract