1 5' 3' | 2 5' 3' | 3 5' 3' |
...gggggggacggtgttctttcggggctacatgtacagaaccaatctcccctgtttaatttattttgttttggcttccataaccattgtttttgtgtggcagATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAGATAACCATAATGATTCTCTAGCCAGCAAAATAATGAGAACTAGAATCCC
species | Zea mays |
transcript | GRMZM2G077143_T02 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAG ATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAGEST: gi|211526826|gb|FL147640.1|FL147640
genomic: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAGgtacgtttcc ... tgtgtggcagATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAG
EST: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAG ATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAGEST: gi|211526825|gb|FL147639.1|FL147639
genomic: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAGgtacgtttcc ... tgtgtggcagATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAG
EST: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAG ATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAGEST: gi|148972535|gb|EE023494.2|EE023494
genomic: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAGgtacgtttcc ... tgtgtggcagATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAG
EST: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAG ATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAGEST: gi|76910376|gb|DV163832.1|DV163832
genomic: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAGgtacgtttcc ... tgtgtggcagATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAG
EST: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAG ATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAGEST: gi|61119534|gb|DN560495.1|DN560495
genomic: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAGgtacgtttcc ... tgtgtggcagATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAG
EST: GTCCCCCTCGAGTCCTCCTCCAT-CCCGACGCGGCGGCGCCAGCCTGCAG ATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAGEST: gi|211526827|gb|FL147641.1|FL147641
genomic: GT-CCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAGgtacgtttcc ... tgtgtggcagATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAG
EST: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAG ATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAGEST: gi|211529811|gb|FL147642.1|FL147642
genomic: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAGgtacgtttcc ... tgtgtggcagATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAG
EST: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAG ATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAG
genomic: CGTCCCCTCGACTCCTCCTCCATCCCCGACGCGGCGGCGCCAGCCTGCAGgtacgtttcc ... tgtgtggcagATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAG
cccctgtttaatttattttgttttggcttccataaccattgtttttgtgtggcagATTAGCTTATTACCACCATGGGTAAAAGAAAGCGGTCGTCATGTCAACGAGATAACCATAATGATTCTCTAGCCAGCAAAATAATGAGAACTAGAATCCC
ccataac putative branch site (score: 3)
ttgttttt putative PPT
tttaatttattttgtt TA-rich tract