1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTGATTAAGCAAGTTTCTTGTGGAGCTGTTCATGTCATGGCTCTATCCGAGGATGGTCTACTGCAAGCATGGGgtactgtgcaaccttattcatgatttttaaagcaatgtactggcctgttgttctttactgacttggtgcaaaccttgtcaatcagaagtggtagaactta...
species | Zea mays |
transcript | GRMZM2G074024_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GCTGTTCATGTCATGGCTCTATCCGAGGATGGTCTACTGGCA-GCATGGG GTATACTTGGGGACTGGGAAGCATGGGGCAGCTTGGGCATTGCTCCCTCCAEST: gi|31663993|gb|CD573173.1|CD573173
genomic: GCTGTTCATGTCATGGCTCTATCCGAGGATGGTCTACTG-CAAGCATGGGgtactgtgca ... gtttttgcagGTATACTTGGGGACTGGGAAGCATGGGGCAGCTTGGGCATTGCTCCCTCCA
EST: AGCTGTTCATGTCATGGCTCTATCCGAGGATGGTCTACTGCAAGCATGGG GTATACTTGGGGACTGGGAAGCATGGGGCAGCTTGGGCATTGEST: gi|211047338|gb|FL129969.1|FL129969
genomic: AGCTGTTCATGTCATGGCTCTATCCGAGGATGGTCTACTGCAAGCATGGGgtactgtgca ... gtttttgcagGTATACTTGGGGACTGGGAAGCATGGGGCAGCTTGGGCATTG
EST: AGCTGTTCATGTCATGGCTCTATCCGAGGATGGTCTACTGCAAGCATGGG GTATACTTGGGGACTGGGAAGCATGGGGCAGCTTGGGCATTGCTCCCCTCCEST: gi|76021288|gb|DT948458.1|DT948458
genomic: AGCTGTTCATGTCATGGCTCTATCCGAGGATGGTCTACTGCAAGCATGGGgtactgtgca ... gtttttgcagGTATACTTGGGGACTGGGAAGCATGGGGCAGCTTGGGCATTGCTCCC-TCC
EST: GCTGTTCATGTCATGGCTCTATCCGAGGATGGTCTACCTGCAAGCATGGG GTATACTTGGGGACTGGGAAGCATGGGGCAGCTTGGGCATTGCTCCCTCCA
genomic: GCTGTTCATGTCATGGCTCTATCCGAGGATGGTCTAC-TGCAAGCATGGGgtactgtgca ... gtttttgcagGTATACTTGGGGACTGGGAAGCATGGGGCAGCTTGGGCATTGCTCCCTCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGATTAAGCAAGTTTCTTGTGGAGCTGTTCATGTCATGGCTCTATCCGAGGATGGTCTACTGCAAGCATGGGgtactgtgcaaccttattcatgatttttaaagcaatgtactggcctgttgttctttactgacttggtgcaaaccttgtcaatcagaagtggtagaactta
- - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - AGGATG