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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGCCGCTCACGTGGCGGCCAAGAAGGCCGATCTCGAGGTGGCCATGCTGCTCAGGGACGACCACATCTGCCGGTCCATCAACAACGCACATGTCAATTGgttggtaacctctgctgcctttgttttctcgatccatgaggtagaatagcacttaaaaatcatctcgaacgaatagatgctcagattatccacgaacagg...

Basic information

species Zea mays
transcript GRMZM2G063258_T04
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71330652|gb|DR802102.1|DR802102
EST:     CTCAGGGACGACCACATCTGCCGGTCCATCAACAACGCACATGTCAATTG                         CAAGTACTTATCAGAACACAGATTGCCAGAAAATATCGTCGCAACAACTAG
genomic: CTCAGGGACGACCACATCTGCCGGTCCATCAACAACGCACATGTCAATTGgttggtaacc ... tttactgcagCAAGTACTTATCAGAACACAGATTGCCAGAAAATATCGTCGCAACAACTAG
EST: gi|91870595|gb|EB400977.1|EB400977
EST:     CTCAGGGACGACCACATCTGCCGGTCCATCAACAACGCACATGTCAATTG                         CAAGTACTTATCAGAACACAGATTGCCAGAAAATATCGTCGCAACAACTAG
genomic: CTCAGGGACGACCACATCTGCCGGTCCATCAACAACGCACATGTCAATTGgttggtaacc ... tttactgcagCAAGTACTTATCAGAACACAGATTGCCAGAAAATATCGTCGCAACAACTAG