1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATGTATCGAACAGTGAAGGGAACGACGGCAGACAGATCATGTGCTGCAGgtaaaacatttcttttcctgagttgatattcctcaggagggtcatatcacataatgctagctgaattattggcatggggcgtgcatggttagtatttcaa...
species | Zea mays |
transcript | GRMZM2G039074_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATGTATCGAACAGTGAAGGGAACGACGGCAGACAGATCATGTGCTGCAG GCCATGTCCAGATGAGAGACATGGGCTTTCTGCACAGGGGTTGTGAACTGAEST: gi|76282329|gb|DV021897.1|DV021897
genomic: ATGTATCGAACAGTGAAGGGAACGACGGCAGACAGATCATGTGCTGCAGgtaaaacatt ... tttgctgcagGCCATGTCCAGATGAGAGACATGGGCTTTCTGCACAGGGGTTGTGAACTGA
EST: ATGTATCGAACAGTGAAGGGAACGACGGCAGACAGATCATGTGCTGCAG GCCATGTCCAGATGAGAGACATGGGCTTTCTGCACAGGGGTTGTGAACTGAEST: gi|94473990|gb|EB702948.1|EB702948
genomic: ATGTATCGAACAGTGAAGGGAACGACGGCAGACAGATCATGTGCTGCAGgtaaaacatt ... tttgctgcagGCCATGTCCAGATGAGAGACATGGGCTTTCTGCACAGGGGTTGTGAACTGA
EST: ATGTATCGAACAGTGAAGGGAACGACGGCAGACAGATCATGTGCTGCAG GCCATGTCCAGATGAGAGACATGGGCTTTCTGCCCAGGGGTTGTGAACTGAEST: gi|89758250|gb|DY687502.1|DY687502
genomic: ATGTATCGAACAGTGAAGGGAACGACGGCAGACAGATCATGTGCTGCAGgtaaaacatt ... tttgctgcagGCCATGTCCAGATGAGAGACATGGGCTTTCTGCACAGGGGTTGTGAACTGA
EST: ATGTATCGAACAGTGAAGGGAACGACGGCAGACAGATCATGTGCTGCAG GCCATGTCCAGATGAGAGACATGGGCTTTCTGCACAGGGGTTGTGAACTGA
genomic: ATGTATCGAACAGTGAAGGGAACGACGGCAGACAGATCATGTGCTGCAGgtaaaacatt ... tttgctgcagGCCATGTCCAGATGAGAGACATGGGCTTTCTGCACAGGGGTTGTGAACTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTATCGAACAGTGAAGGGAACGACGGCAGACAGATCATGTGCTGCAGgtaaaacatttcttttcctgagttgatattcctcaggagggtcatatcacataatgctagctgaattattggcatggggcgtgcatggttagtatttcaa
- - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - CTGCAG