Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACGGCCGTCTTCCTCACCGCGGCGCCTTCCTCTTTCTCCACCCGCCGTCGGCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaattccctttcctttctcaccaccatttcgcttctaatctgaactacacgacgcgtgcccag

Basic information

species Zea mays
transcript GRMZM2G024738_T03
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|50334939|gb|CO530065.1|CO530065
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|87152167|gb|DY396956.1|DY396956
EST:     GCGCAGCCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|71329891|gb|DR801664.1|DR801664
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|78122182|gb|DV540566.1|DV540566
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|71418375|gb|DR804419.1|DR804419
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|76928473|gb|DV171639.1|DV171639
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|74241023|gb|DT648937.1|DT648937
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211179947|gb|FL166413.1|FL166413
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211179953|gb|FL166419.1|FL166419
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211182357|gb|FL166429.1|FL166429
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|149048891|gb|EE048391.2|EE048391
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|76292919|gb|DV032487.1|DV032487
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211179958|gb|FL166424.1|FL166424
EST:     GCGCAGCCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211063094|gb|FL166411.1|FL166411
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|18384465|gb|BM417664.1|BM417664
EST:     GCGCAGCCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|74243528|gb|DT651442.1|DT651442
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|50335320|gb|CO530446.1|CO530446
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211063093|gb|FL166410.1|FL166410
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|148958901|gb|EE010466.2|EE010466
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211182360|gb|FL166432.1|FL166432
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|22489735|gb|BU049658.1|BU049658
EST:     GCGCAGCCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211179950|gb|FL166416.1|FL166416
EST:     GCGCAGCCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|91049477|gb|EB159895.1|EB159895
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211179957|gb|FL166423.1|FL166423
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211063095|gb|FL166412.1|FL166412
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGARCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGCCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211179959|gb|FL166425.1|FL166425
EST:     GCGCAGTCGCGCCATCTCCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211179960|gb|FL166426.1|FL166426
EST:     GCGCAGCCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|148991743|gb|EE033314.2|EE033314
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211179949|gb|FL166415.1|FL166415
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211182365|gb|FL166437.1|FL166437
EST:     GCGCAGCCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|13382338|gb|BG459013.1|BG459013
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|31350291|gb|CD434648.1|CD434648
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|21843215|gb|BQ703796.1|BQ703796
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211179955|gb|FL166421.1|FL166421
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211182363|gb|FL166435.1|FL166435
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|211182364|gb|FL166436.1|FL166436
EST:     GCGCAGCCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|13558968|gb|BG550323.1|BG550323
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|71447413|gb|DR828463.1|DR828463
EST:     CTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: CTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|93012244|gb|EB637764.1|EB637764
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCGCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
EST: gi|76280664|gb|DV020232.1|DV020232
EST:     GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGG                         AGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC
genomic: GCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaa ... gcgtgcccagAGGAGCCGCTGCTGGTGCGCGCGGCGCGGGGCGAGGACGGCCTCCCACGCC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ACGGCCGTCTTCCTCACCGCGGCGCCTTCCTCTTTCTCCACCCGCCGTCGGCGCAGTCGCGCCATCTTCGCATCCCTTTCGCCGTCCTTCTCCTCCTCGGgtaaacccaattccctttcctttctcaccaccatttcgcttctaatctgaactacacgacgcgtgcccag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC