1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ACGAGCTCGCCCGAGCAAACCGTCGCCGGTGCCTACCGTTCCCGTCGCCGGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAGgtacgtgattccggctcctcaatcccgttgtcttctccctcctctgccgcggttttctttcccgcttggtcaggttcgcgcttcccgattagtagatgtt...
species | Zea mays |
transcript | GRMZM2G005869_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCCGTCGCCGGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAG CCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACGEST: gi|34391161|gb|CF384389.1|CF384389
genomic: CCCGTCGCCGGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAGgtacgtgatt ... ctgcctgcagCCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
EST: CCCGTCGCCGGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAG CCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACGEST: gi|37621957|gb|CF675010.1|CF675010
genomic: CCCGTCGCCGGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAGgtacgtgatt ... ctgcctgcagCCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
EST: CCCGTCGCCGGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAG CCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACGEST: gi|38229642|gb|CF919955.1|CF919955
genomic: CCCGTCGCCGGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAGgtacgtgatt ... ctgcctgcagCCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
EST: CCCGTCGCCGGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAG CCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACGEST: gi|38229706|gb|CF920019.1|CF920019
genomic: CCCGTCGCCGGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAGgtacgtgatt ... ctgcctgcagCCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
EST: GGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAG CCCGTATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
genomic: GGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAGgtacgtgatt ... ctgcctgcagCCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACGAGCTCGCCCGAGCAAACCGTCGCCGGTGCCTACCGTTCCCGTCGCCGGTGCCTACCGTTCCCGTCGCCGCCCGTCCTCTCTACGGAGgtacgtgattccggctcctcaatcccgttgtcttctccctcctctgccgcggttttctttcccgcttggtcaggttcgcgcttcccgattagtagatgtt
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