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CTCCCTGATGAAGCCAAAGAGCTGGACAAAGAGCTGCGGCAGATAACCAAGCAGAAAAATGAGGCTGTACGTGGCCAAGATTTCGAGAAGgtatactattgtttgactatggattttatgtctatgggttccaacatctccattaacaaacatgacatgttgcaatgttacaaaaatccataaaaacatt...
species | Zea mays |
transcript | GRMZM2G001084_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTACGCGGCCAAGATTTCGAGAAG GCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCCEST: gi|32839503|gb|CD979184.1|CD979184
genomic: GTACGTGGCCAAGATTTCGAGAAGgtatactatt ... ctcttgatagGCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCC
EST: CAAGATTTCGAGAAG GCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCCEST: gi|32842305|gb|CD981986.1|CD981986
genomic: CAAGATTTCGAGAAGgtatactatt ... ctcttgatagGCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCC
EST: GGCCAAGATTTCGAGAAG GCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCCEST: gi|32841739|gb|CD981420.1|CD981420
genomic: GGCCAAGATTTCGAGAAGgtatactatt ... ctcttgatagGCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCC
EST: GTACGCGGCCAAGATTTCGAGAAG GCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCCEST: gi|32842236|gb|CD981917.1|CD981917
genomic: GTACGTGGCCAAGATTTCGAGAAGgtatactatt ... ctcttgatagGCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCC
EST: GGCCAAGATTTCGAGAAG GCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCCEST: gi|32839504|gb|CD979185.1|CD979185
genomic: GGCCAAGATTTCGAGAAGgtatactatt ... ctcttgatagGCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCC
EST: ACGTGGCCAAGATTTCGAGAAG GCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCCEST: gi|211161958|gb|FL101571.1|FL101571
genomic: ACGTGGCCAAGATTTCGAGAAGgtatactatt ... ctcttgatagGCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCC
EST: AGATAACCAAGCAGAAAAATGAGGCTGTACGTGGCCAAGATTTCGAGAAG GCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCC
genomic: AGATAACCAAGCAGAAAAATGAGGCTGTACGTGGCCAAGATTTCGAGAAGgtatactatt ... ctcttgatagGCTGGCGAATTAAGGGACCGAGAAATGGAGCTTAAGGCTCAAATTACAGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCCCTGATGAAGCCAAAGAGCTGGACAAAGAGCTGCGGCAGATAACCAAGCAGAAAAATGAGGCTGTACGTGGCCAAGATTTCGAGAAGgtatactattgtttgactatggattttatgtctatgggttccaacatctccattaacaaacatgacatgttgcaatgttacaaaaatccataaaaacatt
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