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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTTTTGACCGAGATATTGAATGCATCTACAAGTTCTTTAACAAAAGgttataagatatgcaagaaagcttcaaatgagcctaatttggtaggcttgttttcttattgtgatttcttttctttctgttag

Basic information

species Zea mays
transcript AC207309.3_FGT005
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AC207309.3_FGT005 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os01g66520.1 (Oryza sativa), 5'ss of exon 9
GTTTTTTGACCGAGATATTGAATGCATCTACAAGTTCTTTAACAAAAGgttataagatatgcaaga---aagcttcaaatgagcctaatttggtaggcttgt-----tttcttattgtgatttcttttcttt--ctgttag--
||||||||| ||||||||||||||||||||||| |||||||  || |||||||    |||  ||      | | ||||   |    | ||||||   |||       ||| | | |  | |||||||| |||   | ||    
GTTTTTTGATCGAGATATTGAATGCATCTACAAATTCTTTAGGAAGAGgttattgtctatttaatgctggaacctcaac--aattcattttggtgcacttcaacacatttgtcaataagctttcttttgtttatttattgtag