1 5' 3' | 2 5' 3' | 3 5' 3' |
CTCTCTCTCTCTCTCTCTTTGTCTCTCTCTACTCTCTAGACAGTCGATTAAAGGTGCACAAATGTGCGGAAAGATGGAGCACATCCACATGGAACACAAGgtgtgtatttcatctagtttctgttctagctagagatgtgaatccatatataactactggtgttttgttaagattaactaaaaaggttaaaatagtttaattccttgttagagtcatgtactagtacttactggttgtttgtgtgtgtgtgtattcatccaattcatcag
species | Zea mays |
transcript | AC204611.4_FGT001 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAGGTGCACAAATGTGCGGAAAGATGGAGCACATCCACATGGAACACAAG GGCTTACTAGGTGGAGAATTTAAAGATGGAATCTGCGCCTCAGTTCCCAGCEST: gi|78109699|gb|DV528115.1|DV528115
genomic: AAGGTGCACAAATGTGCGGAAAGATGGAGCACATCCACATGGAACACAAGgtgtgtattt ... aattcatcagGGCTTACTAGGTGGAGAATTTAAAGATGGAATCTGCGCCTCAGTTCCCAGC
EST: AAGGTGCACAAATGTGCGGAAAGATGGAGCACATCCACATGGAACACAAG GGCTTACTAGGTGGAGAATTTAAAGATGGAATCTGCGCCTCAGTTCCCAGC
genomic: AAGGTGCACAAATGTGCGGAAAGATGGAGCACATCCACATGGAACACAAGgtgtgtattt ... aattcatcagGGCTTACTAGGTGGAGAATTTAAAGATGGAATCTGCGCCTCAGTTCCCAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCTCTCTCTCTCTCTCTTTGTCTCTCTCTACTCTCTAGACAGTCGATTAAAGGTGCACAAATGTGCGGAAAGATGGAGCACATCCACATGGAACACAAGgtgtgtatttcatctagtttctgttctagctagagatgtgaatccatatataactactggtgttttgttaagattaactaaaaaggttaaaatagtttaattccttgttagagtcatgtactagtacttactggttgtttgtgtgtgtgtgtattcatccaattcatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA