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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgcagactccgtaccaacagctgtggccttgttattgcatttttttggttgttgatctgattagcattaaatatttctgtccgaatcagTGGTCCTTATGTGGAAATTGATATGAGATCGGGCGACATTGATTGCTACGATGCCATTTTTTTAAGTCCACACAAGTTTCTCGGCGGACCTGGGTCCCCG

Basic information

species Vitis vinifera
transcript Vv04s0044g01170.t01
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttgcatttttttggttgttgatctgattagcattaaatatttctgtccgaatcagTGGTCCTTATGTGGAAATTGATATGAGATCGGGCGACATTGATTGCTACGATGCCATTTTTTTAAGTCCACACAAGTTTCTCGGCGGACCTGGGTCCCCG
                    atctgat  putative branch site (score: 4)
                                       tttctgtcc  putative PPT
                         attagcattaaatatt  TA-rich tract