Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgcctgttccaattaagcttctttaacacaatttcttctcccatttcaccatctgtttgcatttttttatattccag

Basic information

species Vitis vinifera
transcript Vv01s0010g03900.t01
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|45771389|gb|CN007241.1|CN007241
EST:     ACGCAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|30305639|gb|CB982433.1|CB982433
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|27583247|gb|CB005942.1|CB005942
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110399072|gb|EC965559.1|EC965559
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71873908|gb|DT022963.1|DT022963
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|22015478|gb|BQ800512.1|BQ800512
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110712089|gb|EE089314.1|EE089314
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|32245742|gb|CD711561.1|CD711561
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71867007|gb|DT016062.1|DT016062
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71868487|gb|DT017542.1|DT017542
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|77588988|gb|DV223747.1|DV223747
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110403805|gb|EC969577.1|EC969577
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|30131761|gb|CB917100.1|CB917100
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110723421|gb|EE100715.1|EE100715
EST:     ACACAGTACATGCTGGATCAACACACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|77580059|gb|DV218917.1|DV218917
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGA
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGA
EST: gi|110359151|gb|EC920177.1|EC920177
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71867060|gb|DT016115.1|DT016115
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|30136740|gb|CB922078.1|CB922078
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|46910025|gb|CN545400.1|CN545400
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71889053|gb|DT038108.1|DT038108
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|27585959|gb|CB008654.1|CB008654
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110712423|gb|EE090024.1|EE090024
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71889042|gb|DT038097.1|DT038097
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|33403302|gb|CF208929.1|CF208929
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110704734|gb|EE081744.1|EE081744
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|27585043|gb|CB007738.1|CB007738
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|30303485|gb|CB980279.1|CB980279
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110388584|gb|EC953349.1|EC953349
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110719743|gb|EE095140.1|EE095140
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110694549|gb|EE071752.1|EE071752
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|22007094|gb|BQ792128.1|BQ792128
EST:     ACACAGTACATGCTGGATCAACTCACCGATTTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110687669|gb|EE065341.1|EE065341
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71876424|gb|DT025479.1|DT025479
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|22007696|gb|BQ792730.1|BQ792730
EST:     ACACAGTACATGCTGGATCAACTCACCGATTTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71873370|gb|DT022425.1|DT022425
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|46910753|gb|CN546128.1|CN546128
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|30252295|gb|CB969846.1|CB969846
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|27584817|gb|CB007512.1|CB007512
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|77582677|gb|DV220326.1|DV220326
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110380407|gb|EC945670.1|EC945670
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110718560|gb|EE095529.1|EE095529
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110425607|gb|EC991996.1|EC991996
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71867280|gb|DT016335.1|DT016335
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71875707|gb|DT024762.1|DT024762
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAA
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAA
EST: gi|110713700|gb|EE089849.1|EE089849
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110715716|gb|EE094085.1|EE094085
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71865752|gb|DT014807.1|DT014807
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCA
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCA
EST: gi|110730953|gb|EE108621.1|EE108621
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|46910218|gb|CN545593.1|CN545593
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71865126|gb|DT014181.1|DT014181
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110376019|gb|EC941058.1|EC941058
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|77585438|gb|DV221807.1|DV221807
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGGTTGTTGGA
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGGTTGTTGGA
EST: gi|27585475|gb|CB008170.1|CB008170
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAAC
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAAC
EST: gi|110721102|gb|EE097716.1|EE097716
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|22007502|gb|BQ792536.1|BQ792536
EST:     ACACAGTACATGCTGGATCAACTCACCGATTTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|30302572|gb|CB979366.1|CB979366
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71868156|gb|DT017211.1|DT017211
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110697731|gb|EE074976.1|EE074976
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110386460|gb|EC951055.1|EC951055
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|46910325|gb|CN545700.1|CN545700
EST:     ACACAGTACATGCTGGATCAACTCACCGACCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCTTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110712595|gb|EE090396.1|EE090396
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110429920|gb|EC996434.1|EC996434
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|30136573|gb|CB921911.1|CB921911
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|33402486|gb|CF208113.1|CF208113
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110719853|gb|EE095340.1|EE095340
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71870760|gb|DT019815.1|DT019815
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110418961|gb|EC985146.1|EC985146
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|33402399|gb|CF208026.1|CF208026
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110404999|gb|EC970527.1|EC970527
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71879172|gb|DT028227.1|DT028227
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCT
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCT
EST: gi|30303546|gb|CB980340.1|CB980340
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|46910693|gb|CN546068.1|CN546068
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110714743|gb|EE092000.1|EE092000
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110723744|gb|EE101406.1|EE101406
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAAG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110408461|gb|EC974097.1|EC974097
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110728910|gb|EE104892.1|EE104892
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71867358|gb|DT016413.1|DT016413
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|30302645|gb|CB979439.1|CB979439
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71871586|gb|DT020641.1|DT020641
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|46910219|gb|CN545594.1|CN545594
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|77586803|gb|DV222545.1|DV222545
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110414093|gb|EC979917.1|EC979917
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|22015537|gb|BQ800571.1|BQ800571
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110727365|gb|EE104044.1|EE104044
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110711620|gb|EE088309.1|EE088309
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGNAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110724056|gb|EE099551.1|EE099551
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71877236|gb|DT026291.1|DT026291
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71877899|gb|DT026954.1|DT026954
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|22012123|gb|BQ797157.1|BQ797157
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|71883518|gb|DT032573.1|DT032573
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110428007|gb|EC994466.1|EC994466
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|77579970|gb|DV218863.1|DV218863
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|27584939|gb|CB007634.1|CB007634
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGGTTGTTGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGGTTGTTGG
EST: gi|110383592|gb|EC947973.1|EC947973
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110722860|gb|EE099514.1|EE099514
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|77584215|gb|DV221169.1|DV221169
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110366970|gb|EC930890.1|EC930890
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110723441|gb|EE100759.1|EE100759
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         -AACACATGCTCAATGAAGCAAACAAGACCCTGAAACAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|30252207|gb|CB969758.1|CB969758
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|51050785|gb|CO818727.1|CO818727
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110392025|gb|EC957144.1|EC957144
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|110399754|gb|EC966279.1|EC966279
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
EST: gi|77583144|gb|DV220607.1|DV220607
EST:     ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAG                         GAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG
genomic: ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgc ... tatattccagGAACACATGCTCAATGAAGCAAACAAGACCCTGAAGCAAAGG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ACACAGTACATGCTGGATCAACTCACCGATCTTCAGAGAAAGgtacaattgcctgttccaattaagcttctttaacacaatttcttctcccatttcaccatctgtttgcatttttttatattccag

- - - -  ATGCTG
- - - - -  GCTGGA