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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGAAGACCCGCCTGGATATGCAAGACGAGGGCGTCCCTTCCACCGCATTGCGCGAAGTGGCGCTTCTCCATATGCTCTCTCAGAGCCTCTACGTTGTGAGgtatgattttttcgctggaagcttgcaaatttgtgttcttccttttttttcttgctaccag

Basic information

species Selaginella moellendorffii
transcript EFJ32755
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ32755 (Selaginella moellendorffii), 5'ss of exon 1
lower sequence: PP1S127_92V6.1 (Physcomitrella patens), 5'ss of exon 1
AGAAGACCCGCCTGGATATGCAAGACGAGGGCGTCCCTTCCACCGCATTGCGCGAAGTGGCGCTTCTCCATATGCTCTCTCAGAGCCTCTACGTTGTGAGgtatgattttttcgctggaagcttg----caaatttgtgttcttccttttttttcttgctaccag-----------------------------------
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AGAAGACTAGGTTGGAGATGGAGGAAGAAGGCGTCCCTTCCACCGCTTTGCGCGAAGTTTCGTTGCTACAAATGCTCTCCCACAGCATGTATATCGTCAGgttggaccatgtcccgaggtcgttttcttcaagttgtcaccctttgctggtttagaggccttcataccgcctatgctggcttgggtttttttaggtcaac