1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CCCAGGCAATCCTTTGCGCACAGGTTTCCTAACGTGCCCCCGCTCGCCGTCGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAGgtaagctccgctgctggcatgtgtaaagctcttgatatactactgcctgccacag
species | Selaginella moellendorffii |
transcript | EFJ22596 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAG TGACAGAAGCTCTTGCCCATCCATACCTCACAAACCTGCACGACGTCAACGEST: gi|169059333|gb|FE467488.1|FE467488
genomic: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAGgtaagctccg ... cctgccacagTGACAGAAGCTCTTGCCCATCCATACCTCACAAACCTTCACGACGTCAACG
EST: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAG TGACAGAAGCTCTTGCCCATCCATACCTCACAAACCTGCACGACGTCNACGEST: gi|169106377|gb|FE507415.1|FE507415
genomic: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAGgtaagctccg ... cctgccacagTGACAGAAGCTCTTGCCCATCCATACCTCACAAACCTTCACGACGTCAACG
EST: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAG TGACAGAAGCTCTTGCCCATCCATACCTCACAAACCTTCACGACGTCAACGEST: gi|70670810|gb|DN839387.1|DN839387
genomic: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAGgtaagctccg ... cctgccacagTGACAGAAGCTCTTGCCCATCCATACCTCACAAACCTTCACGACGTCAACG
EST: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAG TGACAGAAGCTCTTGCCCATCCATACCCCACAAACCTGCACGACGTCAACGEST: gi|169043885|gb|FE453824.1|FE453824
genomic: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAGgtaagctccg ... cctgccacagTGACAGAAGCTCTTGCCCATCCATACCTCACAAACCTTCACGACGTCAACG
EST: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAG TGACAGAAGCTCTTGCCCATCCATACCTCACAAACCTGCACGACGTCAACGEST: gi|169033984|gb|FE442016.1|FE442016
genomic: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAGgtaagctccg ... cctgccacagTGACAGAAGCTCTTGCCCATCCATACCTCACAAACCTTCACGACGTCAACG
EST: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAG TGACAGAAGCTCTTGCCCATCCATACCTCACAAACCTGCACGACGTCAACG
genomic: CGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAGgtaagctccg ... cctgccacagTGACAGAAGCTCTTGCCCATCCATACCTCACAAACCTTCACGACGTCAACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCAGGCAATCCTTTGCGCACAGGTTTCCTAACGTGCCCCCGCTCGCCGTCGATCTCGTGGAGAGGATGCTCGTGTTCAATCCGCAGAACCGAATCTCAGgtaagctccgctgctggcatgtgtaaagctcttgatatactactgcctgccacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG