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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtctgtctagtatcctattgtgaaagtgccccgtcgcccacgacttgttggaaccgggtgatcagcgtgctagtgactacatcatcccaagaaggagaaaggcgccaggcctcgtttcatcggcaacctggtgaagtgtacgagtaaaagataaatcggattaactccatttactccttcctagGCCGCCGCGGAGTCTGCTGCTAAGAAACCTTTGTCGGGTCCTCCAAGACGAAAGTGTGATTGGGCTTTTGAAATCGCTTGGATGGCAAATGATTTCATGC

Basic information

species Selaginella moellendorffii
transcript EFJ22545
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggtgaagtgtacgagtaaaagataaatcggattaactccatttactccttcctagGCCGCCGCGGAGTCTGCTGCTAAGAAACCTTTGTCGGGTCCTCCAAGACGAAAGTGTGATTGGGCTTTTGAAATCGCTTGGATGGCAAATGATTTCATGC
                             gattaac  putative branch site (score: 2)
                                   ctccatttactccttc  CT-rich tract
             agtaaaagataaat  TA-rich tract