1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GCGGCGGTGGACTGTGAAGCAGGGAATGCCGAGAACGAGGCGCAGCAGAGTCACGGCGCAGAGAGCTGGGAAGGAGCAATGTTTCCCTTCTGTGAAGAAGgtactcaaacttagtttttctttcgttttctctagcgtttgctgataatctcttgtttccagactag
species | Selaginella moellendorffii |
transcript | EFJ22256 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TCACGGCGCAGAGAGCTGGGAAGGAGCAATGTTTCCCTTCTGTGAAGAAG AEST: gi|169044702|gb|FE452496.1|FE452496
genomic: TCACGGCGCAGAGAGCTGGGAAGGAGCAATGTTTCCCTTCTGTGAAGAAGgtactcaaac ... tccagactag-
EST: TCACGGCGCAGAGAGCTGGGAAGGAGCAATGTTTCCCTTCTGTGAAGAAG AEST: gi|169044702|gb|FE452496.1|FE452496
genomic: TCACGGCGCAGAGAGCTGGGAAGGAGCAATGTTTCCCTTCTGTGAAGAAGgtactcaaac ... tccagactag-
EST: TCACGGCGCAGAGAGCTGGGAAGGAGCAATGTTTCCCTTCTGTGAAGAAG A
genomic: TCACGGCGCAGAGAGCTGGGAAGGAGCAATGTTTCCCTTCTGTGAAGAAGgtactcaaac ... tccagactag-
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGGCGGTGGACTGTGAAGCAGGGAATGCCGAGAACGAGGCGCAGCAGAGTCACGGCGCAGAGAGCTGGGAAGGAGCAATGTTTCCCTTCTGTGAAGAAGgtactcaaacttagtttttctttcgttttctctagcgtttgctgataatctcttgtttccagactag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG