1 5' 3' | 2 5' 3' | 3 5' 3' |
TTTCGGGCAGTACATGCGACCGACGAAGAAACACATGCCAGTGTCCGAGTACGTGACTCCGGAAGCGTTCGAGAACTATCGAAGAATCGGAATGGAAATGgtacgttttcgaagtttcgaagtgtttttgtttttttttttccagctgaagcgtgaaaatctctttttcctttgtttcttacag
species | Selaginella moellendorffii |
transcript | EFJ13029 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACGTGACTCCGGAAGCGTTCGAGAACTATCGAAGAATCGGAATGGAAATG GGATTTCGATATGTGGCTTCAGGCCCAATGGTGAGATCCTCCTACAAAGCTEST: gi|169106453|gb|FE507452.1|FE507452
genomic: ACGTGACTCCGGAAGCGTTCGAGAACTATCGAAGAATCGGAATGGAAATGgtacgttttc ... tttcttacagGGATTTCGATATGTGGCTTCAGGCCCAATGGTGAGATCCTCCTACAAAGCT
EST: ACGTGACTCCGGAAGCGTTCGAGAACTATCGAAGAATCGGAATGGAAATG GGATTTCGATATGTGGCTTCTGGCCCAATGGTGAGATCCTCCTACAAAGCTEST: gi|169048494|gb|FE454402.1|FE454402
genomic: ACGTGACTCCGGAAGCGTTCGAGAACTATCGAAGAATCGGAATGGAAATGgtacgttttc ... tttcttacagGGATTTCGATATGTGGCTTCAGGCCCAATGGTGAGATCCTCCTACAAAGCT
EST: ACGTGACTCCGGAAGCGTTCGAGAACTATCGAAGAATCGGAATGGAAATG GGATTTCGATATGTGGCTTCTGGCCCAATGGTGAGATCCTCCTACAAAGCTEST: gi|169073648|gb|FE481360.1|FE481360
genomic: ACGTGACTCCGGAAGCGTTCGAGAACTATCGAAGAATCGGAATGGAAATGgtacgttttc ... tttcttacagGGATTTCGATATGTGGCTTCAGGCCCAATGGTGAGATCCTCCTACAAAGCT
EST: ACGTGACTCCGGAAGCGTTCGAGAACTATCGAAGAATCGGAATGGAAATG GGATTTCGATATGTGGCTTCTGGCCCAATGGTGAGATCCTCCTACAAAGCT
genomic: ACGTGACTCCGGAAGCGTTCGAGAACTATCGAAGAATCGGAATGGAAATGgtacgttttc ... tttcttacagGGATTTCGATATGTGGCTTCAGGCCCAATGGTGAGATCCTCCTACAAAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCGGGCAGTACATGCGACCGACGAAGAAACACATGCCAGTGTCCGAGTACGTGACTCCGGAAGCGTTCGAGAACTATCGAAGAATCGGAATGGAAATGgtacgttttcgaagtttcgaagtgtttttgtttttttttttccagctgaagcgtgaaaatctctttttcctttgtttcttacag
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