1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTTCACACCTGTTCCTGTGTCGGCTATTTCCGGTTCTGGTGTCCCGGATTTACTCGAGGATGTGACTTCCGCAATCAAGGAGAAACAGgtatagatgatcagtactgaaagacaataactgtttttctatttaccag
species | Selaginella moellendorffii |
transcript | EFJ13010 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GTGTCCCGGATTTACTCGAGGATGTGACTTCCGCAATCAAGGAGAAACAG GATGAGTTAGAAGCGAGCGAAGGCGACCGGCCTTTATCTGTGGCAATTATTEST: gi|169088463|gb|FE495509.1|FE495509
genomic: GTGTCCCGGATTTACTCGAGGATGTGACTTCCGCAATCAAGGAGAAACAGgtatagatga ... tatttaccagGATGAGTTAGAAGCGAGCGAAGGCGACCGGCCTTTATCTGTGGCAATTATT
EST: GTGTCCCGGATTTACTCGAGGATGTGACTTCCGCAATCAAGGAGAAACAG GATGAGTTAGAAGCGAGCGAAGGCGACCGGCCTTTATCTGTGGCAATTATT
genomic: GTGTCCCGGATTTACTCGAGGATGTGACTTCCGCAATCAAGGAGAAACAGgtatagatga ... tatttaccagGATGAGTTAGAAGCGAGCGAAGGCGACCGGCCTTTATCTGTGGCAATTATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCACACCTGTTCCTGTGTCGGCTATTTCCGGTTCTGGTGTCCCGGATTTACTCGAGGATGTGACTTCCGCAATCAAGGAGAAACAGgtatagatgatcagtactgaaagacaataactgtttttctatttaccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA