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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGGAATGGCATCAGGGTTTCCAGCTCCTCCGCCGCTCTGCCATCGCCGCGCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggtccttcccctgtttcatcgatgctatgctacattgtggaaatttggagagattgatggagatgtgctcgttcttgtgtgccag

Basic information

species Selaginella moellendorffii
transcript EFJ09199
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169050488|gb|FE458880.1|FE458880
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169067895|gb|FE474766.1|FE474766
EST:     AAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: AAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169100155|gb|FE502395.1|FE502395
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169103735|gb|FE506100.1|FE506100
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169113418|gb|FE514745.1|FE514745
EST:     GGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169105850|gb|FE503534.1|FE503534
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169053853|gb|FE460944.1|FE460944
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169037802|gb|FE442513.1|FE442513
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169071952|gb|FE478174.1|FE478174
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169056887|gb|FE466465.1|FE466465
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169067909|gb|FE474767.1|FE474767
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169024737|gb|FE433284.1|FE433284
EST:     AAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: AAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169074223|gb|FE481909.1|FE481909
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|70669288|gb|DN837865.1|DN837865
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169107215|gb|FE508240.1|FE508240
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169069724|gb|FE477051.1|FE477051
EST:     TGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: TGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169058569|gb|FE464295.1|FE464295
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169046566|gb|FE457479.1|FE457479
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169111488|gb|FE510348.1|FE510348
EST:     GGCCACATCGGACAAGCCAGCCACG                         AAAGC-AATAGGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCT
genomic: GGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATA-GGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCT
EST: gi|169109495|gb|FE509565.1|FE509565
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|70669503|gb|DN838080.1|DN838080
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169024738|gb|FE433285.1|FE433285
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169043835|gb|FE453501.1|FE453501
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169113419|gb|FE514746.1|FE514746
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169070018|gb|FE476487.1|FE476487
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|70670024|gb|DN838601.1|DN838601
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169045843|gb|FE453077.1|FE453077
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169023436|gb|FE430060.1|FE430060
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169055604|gb|FE464637.1|FE464637
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169058114|gb|FE466570.1|FE466570
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169069896|gb|FE480356.1|FE480356
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169068287|gb|FE478942.1|FE478942
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169042709|gb|FE451528.1|FE451528
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169071030|gb|FE477369.1|FE477369
EST:     CAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: CAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169075776|gb|FE481850.1|FE481850
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169071031|gb|FE477370.1|FE477370
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169069779|gb|FE477496.1|FE477496
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169068286|gb|FE478941.1|FE478941
EST:     CCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: CCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169107047|gb|FE505992.1|FE505992
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCANAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169036874|gb|FE446018.1|FE446018
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169111489|gb|FE510349.1|FE510349
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169023980|gb|FE436466.1|FE436466
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169111943|gb|FE512207.1|FE512207
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169113577|gb|FE514488.1|FE514488
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169069725|gb|FE477052.1|FE477052
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169099225|gb|FE502063.1|FE502063
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|70669552|gb|DN838129.1|DN838129
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169100979|gb|FE500606.1|FE500606
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169045015|gb|FE450898.1|FE450898
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|70669134|gb|DN837711.1|DN837711
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169069778|gb|FE477495.1|FE477495
EST:     CACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: CACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169104191|gb|FE507180.1|FE507180
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169106501|gb|FE503860.1|FE503860
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169051423|gb|FE457695.1|FE457695
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169054808|gb|FE460604.1|FE460604
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169047668|gb|FE454836.1|FE454836
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169036448|gb|FE443538.1|FE443538
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169105536|gb|FE504090.1|FE504090
EST:     GCAAGCTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCAAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169054503|gb|FE462587.1|FE462587
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169068719|gb|FE479764.1|FE479764
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
EST: gi|169050074|gb|FE460142.1|FE460142
EST:     GCAAGGTCTCCAGAATCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGT
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGT
EST: gi|169071815|gb|FE477595.1|FE477595
EST:     GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACG                         AAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA
genomic: GCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 175

TGGGAATGGCATCAGGGTTTCCAGCTCCTCCGCCGCTCTGCCATCGCCGCGCAAGGTCTCCAGATTCGTGGTGAGGGCCACATCGGACAAGCCAGCCACGgtaatgtggt ... tgtgtgccagAAAGCGAATAGGCAGCTGTGGTTCGCGTCGTCGCAAAGCTTGTCCTACCTAGATGGAAC




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