Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18362704|gb|BJ194775.1|BJ194775EST: ATTGACGTCGTCTCAGGTTTTCTTAATCAAGCTATTCCTGGAATAGTCAG ATTTGATGATACGAAATCTGAGCTAAGCCTACTCTCTTCCATGGCTTACGG
genomic: ATTGACGTCGTCTCAGGTTTTCTTAATCAAGCTATTCCTGGAATAGTCAGgtgaggaaac ... tttggcccagATTTGATGATACGAAATCTGAGCTAAGCCTACTCTCTTCCATGGCTTACGG
EST:
gi|162169006|gb|FC345688.1|FC345688EST: ATTGACGTCGTCTCAGGTTTTCTTAATCAAGCTATTCCTGGAATAGTCAG ATTTGATGATACGAAATCTGAGCTAAGCCTACTCTCTTCCATGGCTTACGG
genomic: ATTGACGTCGTCTCAGGTTTTCTTAATCAAGCTATTCCTGGAATAGTCAGgtgaggaaac ... tttggcccagATTTGATGATACGAAATCTGAGCTAAGCCTACTCTCTTCCATGGCTTACGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTGGAGCAGCTCTCATCGTGCTTTATTTGGCAGCCTTTTCACTGCGAAGTATTGACGTCGTCTCAGGTTTTCTTAATCAAGCTATTCCTGGAATAGTCAGgtgaggaaacagctgatagaatcacttccattgtgtcgcccctcttgtatgcacacaagtgtgacgcactgtttgacttgctgtagaagctggctatggc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT