1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtaagtacactgtgcttgaactatttgtgctctgtagttaaaatctatctagcagaaattttagaaacatgtacttggaaaattagccattgcggtgattttaaggacacgttttaatgattattgttttttgtatttcttttttttaatcataaacaataacgcggtagatccgtgcctggttctgttagGTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGGCCGTGGTTAAAAACACTGGTGCACGTGGGTTACGTTCCACATTGGAAACTG
species | Physcomitrella patens |
transcript | PP1S98_222V6.1 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: CCCGGAACGCTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAAT GTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGGCCEST: gi|162247500|gb|FC425066.1|FC425066
genomic: CCCGGAACGCTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAATgtaagtacac ... gttctgttagGTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGGCC
EST: CCCGGAACGCTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAAT GTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGGCCEST: gi|162179889|gb|FC355960.1|FC355960
genomic: CCCGGAACGCTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAATgtaagtacac ... gttctgttagGTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGGCC
EST: CCCGGAACGCTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAAT GTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCEST: gi|162179888|gb|FC355959.1|FC355959
genomic: CCCGGAACGCTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAATgtaagtacac ... gttctgttagGTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCC
EST: CCCGGAACGCTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAAT GTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGGCCEST: gi|18335008|gb|BJ167026.1|BJ167026
genomic: CCCGGAACGCTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAATgtaagtacac ... gttctgttagGTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGGCC
EST: CCCGGAACGCTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAAT GTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGGCCEST: gi|37838927|gb|BJ596935.1|BJ596935
genomic: CCCGGAACGCTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAATgtaagtacac ... gttctgttagGTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGGCC
EST: CTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAAT GTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGNCC
genomic: CTCTTGGTAAACAGTACAAGAAGATGTTTGCGATGAACAATgtaagtacac ... gttctgttagGTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGGCC
ttcttttttttaatcataaacaataacgcggtagatccgtgcctggttctgttagGTGAAACTCCATTACACAGAAGGAGGTTTGCGGAGGATTGCCCAGAAGGCCGTGGTTAAAAACACTGGTGCACGTGGGTTACGTTCCACATTGGAAACTG
caataac putative branch site (score: 3)
ttctgtt putative PPT
ttttttaatcataaac TA-rich tract