1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgattcccatcttgcatgagataattgtttcggccaggggttgtcgggtgcttcgcaatagatgagaatgaaagactagatttgcttctgattgctccagcatcacttgatccctttcgacttggcatgttctatactttccatgaaatttgacaacatatggatcgtgcctagtgcagGACATTGCCTATTTGTGGATGCAGAGCATGCATTAGATATGCAATTTGCTGAAGGCATCGGTGTGAACACGAAAGATCTTTTGTTTGTTCAGCCAGATTA
species | Physcomitrella patens |
transcript | PP1S98_157V6.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GACGACGATTGCTCTTCACGTGATTGCACAGGCCCAAAAAATGGGAAAAG GACATTGCCTATTTGTGGATGCAGAGCATGCATTAGATATGCAATTTGCTG
genomic: GACGACGATTGCTCTTCACGTGATTGCACAGGCCCAAAAAATGGGAAAAGgtgattccca ... cctagtgcagGACATTGCCTATTTGTGGATGCAGAGCATGCATTAGATATGCAATTTGCTG
gcatgttctatactttccatgaaatttgacaacatatggatcgtgcctagtgcagGACATTGCCTATTTGTGGATGCAGAGCATGCATTAGATATGCAATTTGCTGAAGGCATCGGTGTGAACACGAAAGATCTTTTGTTTGTTCAGCCAGATTA
atttgac putative branch site (score: 4)
atgaaattt TA-rich tract