1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaatcttgttgctccttcgttgtttcagaatgagttcatttgtaagcttatcaagctgctcctttgtaacttgagttacacgtactttcttcttctctcactgttgttttcttaatagttaacacggcttgtttacgatgttgcctctgcagGTGACTTTTTTGGTTACCCATTTCAGTGATGCCCGCATAGCAAATTCAGATGTGCGAGATATTTTGTTGCAATCAATTTCAGTGTTGGTGCAACATAAGG
species | Physcomitrella patens |
transcript | PP1S98_119V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CTCCATTTGTGACGCCTTCTTCTCTCCTACAACAAGGCCTTTCGCCTCTG GTGACTTTTTTGGTTACCCATTTCAGTGATGCCCGCATAGCANATTCAGATEST: gi|162255850|gb|FC431926.1|FC431926
genomic: CTCCATTTGTGACGCCTTCTTCTCTCCTACAACAAGGCCTTTCGCCTCTGgtaatcttgt ... gcctctgcagGTGACTTTTTTGGTTACCCATTTCAGTGATGCCCGCATAGCAAATTCAGAT
EST: CTCCATTTGTGACGCCTTCTTCTCTCCTACAACAAGGCCTTTCGCCTCTG GTGACTTTTTTGGTTACCCATTTCAGTGATGCCCGCATAGCAAATTCAGAT
genomic: CTCCATTTGTGACGCCTTCTTCTCTCCTACAACAAGGCCTTTCGCCTCTGgtaatcttgt ... gcctctgcagGTGACTTTTTTGGTTACCCATTTCAGTGATGCCCGCATAGCAAATTCAGAT
tcactgttgttttcttaatagttaacacggcttgtttacgatgttgcctctgcagGTGACTTTTTTGGTTACCCATTTCAGTGATGCCCGCATAGCAAATTCAGATGTGCGAGATATTTTGTTGCAATCAATTTCAGTGTTGGTGCAACATAAGG
agttaac putative branch site (score: 3)
ttgcctct putative PPT
ttttcttaatagttaa TA-rich tract