1 5' 3' | 2 5' 3' |
gtataaccctttgtcgaaactagccctcgtgtggtcccgaaatcacgagtgattcgagcatgtcatttgtccttattaggaaatagttttgaatgcgaaggtggtcaggttcctcgtcccgactgtgaaagagttctgtgacttttactgatcccttcgtcagactttctgacatagtgatgtgtattttgtgcatcagCCAGTGGAGGTGACCGTGTCGACGAGTGGCATTGTCGCAGCCTTGAAGTATGCTCTGGGCTCTGGCGAAACTACGCCGTAGTCATGGTGTAAAAATTCTG
species | Physcomitrella patens |
transcript | PP1S97_176V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCAGCATCACGAAGGTGGCACAGCGTCTCATCGTCGTCATCATCGCCAAG CCAGTGGAGGTGACCGTGTCGACGAGTGGCATTGTCGCAGCCTTGAAGTATEST: gi|162215592|gb|FC391671.1|FC391671
genomic: GCAGCATCACGAAGGTGGCACAGCGTCTCATCGTCGTCATCATCGCCAAGgtataaccct ... tgtgcatcagCCAGTGGAGGTGACCGTGTCGACGAGTGGCATTGTCGCAGCCTTGAAGTAT
EST: GCAGCATCACGAAGGTGGCACAGCGTCTCATCGTCGTCATCATCGCCAAG CCAGTGGAGGTGACCGTGTCGACGAGTGGCATTGTCGCAGCCTTGAAGTATEST: gi|37836126|gb|BJ594134.1|BJ594134
genomic: GCAGCATCACGAAGGTGGCACAGCGTCTCATCGTCGTCATCATCGCCAAGgtataaccct ... tgtgcatcagCCAGTGGAGGTGACCGTGTCGACGAGTGGCATTGTCGCAGCCTTGAAGTAT
EST: GCAGCATCACGAAGGTGGCACAGCGTCTCATCGTCGTCATCATCGCCAAG CCAGTGGAGGTGACCGTGTCGACGAGTGGCATTGTCGCAGCCTTGAAGTAT
genomic: GCAGCATCACGAAGGTGGCACAGCGTCTCATCGTCGTCATCATCGCCAAGgtataaccct ... tgtgcatcagCCAGTGGAGGTGACCGTGTCGACGAGTGGCATTGTCGCAGCCTTGAAGTAT
ttactgatcccttcgtcagactttctgacatagtgatgtgtattttgtgcatcagCCAGTGGAGGTGACCGTGTCGACGAGTGGCATTGTCGCAGCCTTGAAGTATGCTCTGGGCTCTGGCGAAACTACGCCGTAGTCATGGTGTAAAAATTCTG
ttctgac putative branch site (score: 4)
tgtatttt TA-rich tract