Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|162215593|gb|FC391672.1|FC391672EST: TGACTAGCAAGTTTGCGATCTTGGAATCTCTGCTACCAATTGGTGTCAAG CGTGACAGGTCTACCATTGTTGAAGACTCTATCGCGCACTTGAAGAATCTG
genomic: TGACTAGCAAGTTTGCGATCTTGGAATCTCTGCTACCAATTGGTGTCAAGgtgagtcttc ... gtggtttcagCGTGACAGGTCTACCATTGTTGAAGACTCTATCGCGCACTTGAAGAATCTG
EST:
gi|19779509|gb|BQ039442.1|BQ039442EST: TGACTAGCAAGTTTGCGATCTTGGAATCTCTGCTACCAATTGGTGTCAAG CGTGACAGGTCTACCATTGTTGAAGACTCTATCGCGCACTTGAAGAATCTG
genomic: TGACTAGCAAGTTTGCGATCTTGGAATCTCTGCTACCAATTGGTGTCAAGgtgagtcttc ... gtggtttcagCGTGACAGGTCTACCATTGTTGAAGACTCTATCGCGCACTTGAAGAATCTG
EST:
gi|7287050|gb|AW599537.1|AW599537EST: TGACTAGCAAGTTTGCGATCTTGGAATCTCTGCTACCAATTGGTGTCAAG CGTGACAGGTCTACCATTGTTGAAGACTCTATCGCGCACTTGAAGAATCTG
genomic: TGACTAGCAAGTTTGCGATCTTGGAATCTCTGCTACCAATTGGTGTCAAGgtgagtcttc ... gtggtttcagCGTGACAGGTCTACCATTGTTGAAGACTCTATCGCGCACTTGAAGAATCTG
EST:
gi|19788841|gb|BQ040955.1|BQ040955EST: TGACTAGCAAGTTTGCGATCTTGGAATCTCTGCTACCAATTGGTGTCAAG CGTGACAGGTCTACCATTGTTGAAGACTCTATCGCGCACTTGAAGAATCTG
genomic: TGACTAGCAAGTTTGCGATCTTGGAATCTCTGCTACCAATTGGTGTCAAGgtgagtcttc ... gtggtttcagCGTGACAGGTCTACCATTGTTGAAGACTCTATCGCGCACTTGAAGAATCTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCCGGAGCAATCTGACCATATTCTGCGAGAGCGGCAGCGTAGAGACGACATGACTAGCAAGTTTGCGATCTTGGAATCTCTGCTACCAATTGGTGTCAAGgtgagtcttcccatctccatctctgtcactttgctgatgtcgctctttagactttgtctagagtcaacggagcgaatttgcagtggttagccatcgttgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG