Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaggtttttattgtcccggactagtttgtgatttcgtcagggttgtagtgttttacactactgtgtcgaatttttagttgttgatgaggattagggtttgatggactagtccatggagctgactgcgagtggctgtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGAACAAATACAACACCCCGAAGTACCGTTTGGTCGTGCGATTT

Basic information

species Physcomitrella patens
transcript PP1S97_115V6.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S97_115V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: AT5G39740.2 (Arabidopsis thaliana), 3'ss of exon 3
gtaaggtttttattgtcccggactagtttgtgatt-tcgtcagggttg---tagtgttttacactactgtgtcgaatttttagttgttgatgaggattagggtttgatggactagtccatggagctgactgcgagtggctgtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGAACAAATACAACACCCCGAAGTACCGTTTGGTCGTGCGATTT--------
                   | | |  | |||  ||   |||| | | |   | |  ||||   ||  | | | || ||| ||           ||||||||  ||| ||  ||      ||  | |   |   |         | |  || ||| ||||| || ||| | || ||||| || || | ||  || ||||||||||| ||||||||||| ||||||||||| || || ||||||        
-------------------gtattgatctgttgttactgtcaagctagacttcgctttttggtctgttatatagagtttatat---------gggattaggtgttg-tgacctgaaagttgttgttc-ttataa---------tctgtagATGGGAAGACTGATTACAGGGCAAGGATCCGTCTTATCAATCAAGACAAGAACAAGTACAACACCCCTAAGTACCGTTTTGTTGTTCGATTTACCAACAA

upper sequence: PP1S97_115V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: Vv05s0094g00870.t01 (Vitis vinifera), 3'ss of exon 2
gtaaggtttttattgtcccggactagtttgtgatttcgtcagggttgtagtgttttacactactg-tgtcgaatttt-tagttgttgatgaggattagggtttgatggactagtccatggagctgactgcgagtggctgtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGAACAAATACAACACCCCGAAGTACCGTTTGGTCGTGCGATTT
                                              ||| |||  |||| | |   |||  | | || ||||| |||     | ||   ||||| | |  |  |  |||||  | | | | |     ||| || | ||  |||||||| |||||| | ||||||||||||||||  |  || ||||||||||| || ||||| ||||| || || || || |||||||||
----------------------------------------------gtattgtactacatttccaatgttcattcttatagtttttg-----ggttttcgtttgttcgctt--tttatggatttaatttctaa-aattgtctacagAG--GGAAAGACTGACTACAGGGCTAGGATTCGCCTGATTAATCAAGACAAGAACAAGTATAACACTCCGAAATATCGCTTTGTTGTGCGATTT

upper sequence: PP1S97_115V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: EFJ31187 (Selaginella moellendorffii), 3'ss of exon 2
gtaaggtttttattgtcccggactagtttgtgatttcgtcagggttgtagtgttttacactactgtgtcgaatttttagttgttgatgaggattagggtttgatggactagtccatggagctgactgcgagtggctgtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGAACAAATACAACACCCCGAAGTACCGTTTGGTCGTGCGATTT
                                                                                      | | |||| || ||    |  || |   |     |  | | |   | |||   | |  ||  || |||||||| || || ||| || | ||| |||| |  ||||||||||||||||||||||| ||||||||||| || ||||| || |||
-------------------------------------------------------------------------------------gtaacgatttggattcttggagcttg---aaatttcacatttctcttcgcttcatctctagAGGGCAAGACCGATTATCGGGCTCGGGTGCGCTTGACGAATCAGGACAAGAACAAATACAACACACCGAAGTACCGATTCGTCGTTCGCTTT

upper sequence: PP1S97_115V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: EFJ17161 (Selaginella moellendorffii), 3'ss of exon 2
gtaaggtttttattgtcccggactagtttgtgatttcgtcagggttgtagtgttttacactactgtgtcgaatttttagttgttgatgaggattagggtttgatggactagtccatggagctgactgcgagtggctgtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGAACAAATACAACACCCCGAAGTACCGTTTGGTCGTGCGATTT
                                                                                            | | | ||||      | |  | || |  |         |    | ||  | ||  || |||||||| || || ||| || | ||| |||| |  ||||||||||||||||||||||| ||||||||||| || ||||| || |||
-------------------------------------------------------------------------------------------gtaacgatttggattcttggagcttgaaatttcacatttctcttcgctt-catagAGGGCAAGACCGATTATCGGGCTCGGGTGCGCTTGACGAATCAGGACAAGAACAAATACAACACACCGAAGTACCGATTCGTCGTTCGCTTT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|67702770|gb|BJ963003.1|BJ963003
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|19783109|gb|BQ039966.1|BQ039966
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208357798|gb|DC902322.1|DC902322
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|100358980|gb|BY946785.1|BY946785
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|19790220|gb|BQ041760.1|BQ041760
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCACAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18374521|gb|BJ206099.1|BJ206099
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162272450|gb|FC448257.1|FC448257
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162239929|gb|FC418758.1|FC418758
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18358508|gb|BJ190567.1|BJ190567
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCANAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208353727|gb|DC929728.1|DC929728
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162277107|gb|FC453329.1|FC453329
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208384078|gb|DC911242.1|DC911242
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|100439619|gb|BY962024.1|BY962024
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208371502|gb|DC931853.1|DC931853
EST:     GACCAAGGCCTACTTTAANAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208353771|gb|DC906459.1|DC906459
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|67575424|gb|BJ948248.1|BJ948248
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162272174|gb|FC448683.1|FC448683
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208356892|gb|DC902388.1|DC902388
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18358614|gb|BJ190673.1|BJ190673
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208366951|gb|DC951438.1|DC951438
EST:     CAGGTTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: CAGG-TCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18370132|gb|BJ201734.1|BJ201734
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|100389906|gb|BY971258.1|BY971258
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18328094|gb|BJ160098.1|BJ160098
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208368428|gb|DC935993.1|DC935993
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGTA-CACCCAGGACAAG
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTG-ACCACCCAGGACAAG
EST: gi|208390486|gb|DC933743.1|DC933743
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208390980|gb|DC929299.1|DC929299
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|67704733|gb|BJ964966.1|BJ964966
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18349423|gb|BJ181472.1|BJ181472
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162206208|gb|FC382278.1|FC382278
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208347286|gb|DC909705.1|DC909705
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208359557|gb|DC943141.1|DC943141
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208355144|gb|DC926753.1|DC926753
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGNTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162234969|gb|FC411756.1|FC411756
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162220864|gb|FC395841.1|FC395841
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18374450|gb|BJ206028.1|BJ206028
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162243425|gb|FC425121.1|FC425121
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208361633|gb|DC942862.1|DC942862
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162229544|gb|FC405878.1|FC405878
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162262087|gb|FC437375.1|FC437375
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18362229|gb|BJ194299.1|BJ194299
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208397615|gb|DC912233.1|DC912233
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208367387|gb|DC939889.1|DC939889
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|100425317|gb|BY977082.1|BY977082
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208369289|gb|DC936062.1|DC936062
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGAACACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208354856|gb|DC942790.1|DC942790
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18368294|gb|BJ200379.1|BJ200379
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18343695|gb|BJ175733.1|BJ175733
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18356386|gb|BJ188445.1|BJ188445
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|100373484|gb|BY948954.1|BY948954
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18356371|gb|BJ188430.1|BJ188430
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162202900|gb|FC380285.1|FC380285
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208376284|gb|DC902665.1|DC902665
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCANAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCNCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208384902|gb|DC903409.1|DC903409
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162208833|gb|FC384969.1|FC384969
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208392600|gb|DC933972.1|DC933972
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208378803|gb|DC927505.1|DC927505
EST:     GACCAAGGCNTACTTTNAGAGGTTTCAGGTCNAGTACCAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTTCGCCTGACCACCCAGGACAAG
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGA-TTCGCCTGACCACCCAGGACAAG
EST: gi|208391402|gb|DC941824.1|DC941824
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18344212|gb|BJ176251.1|BJ176251
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208360756|gb|DC930525.1|DC930525
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162235459|gb|FC411594.1|FC411594
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162233754|gb|FC410020.1|FC410020
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18358605|gb|BJ190664.1|BJ190664
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162276079|gb|FC452355.1|FC452355
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|67719596|gb|BJ969855.1|BJ969855
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|100352787|gb|BY945448.1|BY945448
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208349800|gb|DC905924.1|DC905924
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208362815|gb|DC950615.1|DC950615
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208363956|gb|DC939577.1|DC939577
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208357973|gb|DC943071.1|DC943071
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162278630|gb|FC455028.1|FC455028
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208364289|gb|DC935560.1|DC935560
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18343272|gb|BJ175310.1|BJ175310
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208361369|gb|DC935084.1|DC935084
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208385323|gb|DC915123.1|DC915123
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208368483|gb|DC936006.1|DC936006
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCGGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGAACACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18347561|gb|BJ179608.1|BJ179608
EST:     TCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: TCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208357224|gb|DC942774.1|DC942774
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18364391|gb|BJ196464.1|BJ196464
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|67717608|gb|BJ967867.1|BJ967867
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208397146|gb|DC908160.1|DC908160
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208384808|gb|DC907421.1|DC907421
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208364549|gb|DC930939.1|DC930939
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162241538|gb|FC415492.1|FC415492
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|22492465|gb|BU052388.1|BU052388
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208369918|gb|DC931495.1|DC931495
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208355358|gb|DC929805.1|DC929805
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162201861|gb|FC377795.1|FC377795
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|67575863|gb|BJ948687.1|BJ948687
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18361278|gb|BJ193344.1|BJ193344
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208385399|gb|DC956625.1|DC956625
EST:     ACCAAGGCCTACTTTAANGAGGTTTCA-GTCAAGTACAAACNCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: ACCAAGGCCTACTTTAA-GAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162217877|gb|FC393873.1|FC393873
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208358525|gb|DC930657.1|DC930657
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18355139|gb|BJ187198.1|BJ187198
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208389452|gb|DC929405.1|DC929405
EST:     GACCAAGGCCTACTTTAANAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTANGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162244728|gb|FC423473.1|FC423473
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208355781|gb|DC910547.1|DC910547
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18362030|gb|BJ194097.1|BJ194097
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18368314|gb|BJ200399.1|BJ200399
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162277899|gb|FC453822.1|FC453822
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208345396|gb|DC912985.1|DC912985
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208383860|gb|DC915171.1|DC915171
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162205270|gb|FC380952.1|FC380952
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|18343180|gb|BJ175218.1|BJ175218
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208348028|gb|DC905351.1|DC905351
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162275479|gb|FC451858.1|FC451858
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|67717762|gb|BJ968021.1|BJ968021
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|100437790|gb|BY979829.1|BY979829
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|100359874|gb|BY947165.1|BY947165
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208351849|gb|DC913750.1|DC913750
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208390797|gb|DC938390.1|DC938390
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208390618|gb|DC937550.1|DC937550
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|162198616|gb|FC374775.1|FC374775
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
EST: gi|208389475|gb|DC929414.1|DC929414
EST:     GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAG                         CTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA
genomic: GACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 125

GCTTTTATCAAGCCTAACAAGACCAAGGCCTACTTTAAGAGGTTTCAGGTCAAGTACAAACGCCGCAGAGgtaaggtttt ... gtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGAACAAATACAACACCCCGAAGTACCGTTTGGTCGTGCGATTT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attagggtttgatggactagtccatggagctgactgcgagtggctgtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGAACAAATACAACACCCCGAAGTACCGTTTGGTCGTGCGATTT
                           agctgac  putative branch site (score: 125)
                                            tgtttata  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaaggtttttattgtcccggactagtttgtgatttcgtcagggttgtagtgttttacactactgtgtcgaatttttagttgttgatgaggattagggtttgatggactagtccatggagctgactgcgagtggctgtttatacagCTGGAAAGACCGACTACCGAGCTAGGATTCGCCTGACCACCCAGGACAAGAACAAATACAACACCCCGAAGTACCGTTTGGTCGTGCGATTT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAC