1 5' 3' | 2 5' 3' | 3 5' 3' |
...atgagccagtaacgtccttggactgcccctgaataggtttgttcgagtaagagtcattatgatgctgatattttgcgtgcgcgtgcctgtatgtgttgagTGCTTAACGAACCAGGTGGCACTGTCCTACTGTGAAACTATTTCGACCCAGCCCGTTGTTCTGTACACTTTATGTTGGACTCTGTTGCTTGCGGCCATCG
species | Physcomitrella patens |
transcript | PP1S96_236V6.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: ACGTGCAGCATATCCTCGTTCCTTTTCGCGCCCTTCAACGGC-A----A- T--TT-------CAGGTGGCACTGTCCTACTGTGAAACTATTTCGACCCAGEST: gi|100416868|gb|BY993129.1|BY993129
genomic: ACGTGCAGCATATCCTCGTTCCTTTTCGCGCCCTTCAACGGCAATTTCAGgtatttttcc ... atgtgttgagTGCTTAACGAACCAGGTGGCACTGTCCTACTGTGAAACTATTTCGACCCAG
EST: ACGTGCAGCATATCCTCGTTCCTTTTCGCGCCCTTCAACGGCAATTTCAG TGCTTAACGAACCAGGTGGCACTGTCCTACTGTGAAACTATTTCGACCCAG
genomic: ACGTGCAGCATATCCTCGTTCCTTTTCGCGCCCTTCAACGGCAATTTCAGgtatttttcc ... atgtgttgagTGCTTAACGAACCAGGTGGCACTGTCCTACTGTGAAACTATTTCGACCCAG
agtaagagtcattatgatgctgatattttgcgtgcgcgtgcctgtatgtgttgagTGCTTAACGAACCAGGTGGCACTGTCCTACTGTGAAACTATTTCGACCCAGCCCGTTGTTCTGTACACTTTATGTTGGACTCTGTTGCTTGCGGCCATCG
tgctgat putative branch site (score: 3)
tgatatttt TA-rich tract