1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
...gcatataagatgtagcgatttcacccttcttctgcttctcttgttggttgactagctgcctctgttacaatagagcctcactgatttggatgatttgcagGTGGCAGCTCATGGACTTGATTACAGCTCTCCAGTGTTATCACACACCACACGCGATACTGTATTTTGATTTCTACTTGAGGTCCTTTAATACTGTATAT
species | Physcomitrella patens |
transcript | PP1S96_129V6.1 |
intron # | 19 |
splice site | 3' |
intron type | U2 |
EST: GGAGACCTTTATATTTGAGTGAAGAAAGATATTCTGCTCTTACTGCTATG GTGGCAGCTCATGGACTTGATTACAGCTCTCCAGTGTTATCACACACCACAEST: gi|208374244|gb|DC945290.1|DC945290
genomic: GGAGACCTTTATATTTGAGTGAAGAAAGATATTCTGCTCTTACTGCTATGgtatgctgga ... tgatttgcagGTGGCAGCTCATGGACTTGATTACAGCTCTCCAGTGTTATCACACACCACA
EST: GGAGACCTTTATATTTGAGTGAAGAAAGATATTCTGCTCTTACTGCTATG GTGGCAGCTCATGGACTTGATTACAGCTCTCCAGTGTTATCACACACCACAEST: gi|208386047|gb|DC956563.1|DC956563
genomic: GGAGACCTTTATATTTGAGTGAAGAAAGATATTCTGCTCTTACTGCTATGgtatgctgga ... tgatttgcagGTGGCAGCTCATGGACTTGATTACAGCTCTCCAGTGTTATCACACACCACA
EST: GGAGACCTTTATATTTGAGTGAAGAAAGATATTCTGCTCTTACTGCTATG GTGGCAGCTCATGGACTTGATTACAGCTCTCCAGTGTTATCACACACCACAEST: gi|208372703|gb|DC952590.1|DC952590
genomic: GGAGACCTTTATATTTGAGTGAAGAAAGATATTCTGCTCTTACTGCTATGgtatgctgga ... tgatttgcagGTGGCAGCTCATGGACTTGATTACAGCTCTCCAGTGTTATCACACACCACA
EST: GGAGACCTTTATATTTGAGTGAAGAAAGATATTCTGCTCTTACTGCTATG GTGGCAGCTCATGGACTTGATTACAGCTCTCCAGTGTTATCACACACCACA
genomic: GGAGACCTTTATATTTGAGTGAAGAAAGATATTCTGCTCTTACTGCTATGgtatgctgga ... tgatttgcagGTGGCAGCTCATGGACTTGATTACAGCTCTCCAGTGTTATCACACACCACA
ggttgactagctgcctctgttacaatagagcctcactgatttggatgatttgcagGTGGCAGCTCATGGACTTGATTACAGCTCTCCAGTGTTATCACACACCACACGCGATACTGTATTTTGATTTCTACTTGAGGTCCTTTAATACTGTATAT
cactgat putative branch site (score: 3)
ttacaata TA-rich tract