1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...acaaggtgttagacataaaaaagaaaatattcaccatgagtttattcgtcctaaaaactcacagtttggctctcttgtgtttttttctctttttccaaagGTTATGTTACCGGAAATGCTGGCTGTTCAAGACACAGTTCAAACAACAATAGACACTGTCGCGCAGCCAGGAGTTCACAGCCATGGCCACGATCATGACC
species | Physcomitrella patens |
transcript | PP1S95_92V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TTTTGTTAACCGGTGGTGGGATTGCATGGAATGCAGTTGATACTTTGCAG GTTATGTTACCGGAAATGCTGGCTGTTCAAGACACAGTTCAAACAACAATA
genomic: TTTTGTTAACCGGTGGTGGGATTGCATGGAATGCAGTTGATACTTTGCAGgtatgggcat ... ttttccaaagGTTATGTTACCGGAAATGCTGGCTGTTCAAGACACAGTTCAAACAACAATA
tcgtcctaaaaactcacagtttggctctcttgtgtttttttctctttttccaaagGTTATGTTACCGGAAATGCTGGCTGTTCAAGACACAGTTCAAACAACAATAGACACTGTCGCGCAGCCAGGAGTTCACAGCCATGGCCACGATCATGACC
aactcac putative branch site (score: 10)
tttggctctcttgtgt putative PPT
tttttttctcttttt TA-rich tract