Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|67508362|gb|BJ941230.1|BJ941230EST: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAG TTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
genomic: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAGgtgagtgacg ... tcgtgtgcagTTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
EST:
gi|18358738|gb|BJ190797.1|BJ190797EST: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAG TTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
genomic: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAGgtgagtgacg ... tcgtgtgcagTTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
EST:
gi|18348552|gb|BJ180601.1|BJ180601EST: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAG TTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
genomic: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAGgtgagtgacg ... tcgtgtgcagTTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
EST:
gi|162256088|gb|FC431261.1|FC431261EST: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAG TTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
genomic: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAGgtgagtgacg ... tcgtgtgcagTTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
EST:
gi|18361737|gb|BJ193804.1|BJ193804EST: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCTTCTGTTTTTCAG TTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTTCTTGAACGCTGAT
genomic: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAGgtgagtgacg ... tcgtgtgcagTTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
EST:
gi|67575796|gb|BJ948620.1|BJ948620EST: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAG TTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
genomic: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAGgtgagtgacg ... tcgtgtgcagTTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
EST:
gi|18373919|gb|BJ205497.1|BJ205497EST: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCTTCTGTTTTTCAG TTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTTCTTGAACGCTGAT
genomic: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAGgtgagtgacg ... tcgtgtgcagTTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
EST:
gi|18359771|gb|BJ191832.1|BJ191832EST: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCTTCTGTTTTTCAG TTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTTCTTGAACGCTGAT
genomic: AGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAGgtgagtgacg ... tcgtgtgcagTTTGGAGCAGAGTAAGGAGTAAGAAGGAATAGCCGGTGCTTGAACGCTGAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ACGAGTGAAGCGAACGTTTGCGAAGGTTGTACTGTGCGCTGCTGGTAGCGAGAGGATCCGACAGCACCGTGGAGGGAGGCTCGGACCCTCTGTTTTTCAGgtgagtgacggtgccttgccctctgatcggatggtatgcaccatcttcatgcttgataagttgtggatgcttagacgtcggaggcggcttgtgagctttc
- - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG