Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18350479|gb|BJ182530.1|BJ182530EST: GGCTCAGCGCTTGGTGGCGACCCCCAGTGCGCTCTGGCGTTTGTCGGAG ATTTCAAGCGCCACTTTCAAGCCTGTGAAGACCTTTCTTAGCCTACGTAAG
genomic: GGCTCAGCGCTTGGTGGCGACCCCCAGTGCGCTCTGGCGTTTGTCGGAGgtaggtcttc ... atttctgcagATTTCAAGCGCCACTTTCAAGCCTGTGAAGACCTTTCTTAGCCTACGTAAG
EST:
gi|208393923|gb|DC938478.1|DC938478EST: GGGCTCAGCGCTTGGTGGCGACCCCCAGTGCGCTCTGGCGTTTGTCGGAG ATTTCAAGCGCCACTTTCAAGCCTGTGAAGACCTTTCTTAGCCTACGTAAG
genomic: GGGCTCAGCGCTTGGTGGCGACCCCCAGTGCGCTCTGGCGTTTGTCGGAGgtaggtcttc ... atttctgcagATTTCAAGCGCCACTTTCAAGCCTGTGAAGACCTTTCTTAGCCTACGTAAG
EST:
gi|162248124|gb|FC420844.1|FC420844EST: CTTGGTGGCGACCCCCAGTGCGCTCTGGCGTTTGTCGGAG ATTTCAAGCGCCACTTTCAAGCCTGTGAAGACCTTTCTTAGCCTACGTAAG
genomic: CTTGGTGGCGACCCCCAGTGCGCTCTGGCGTTTGTCGGAGgtaggtcttc ... atttctgcagATTTCAAGCGCCACTTTCAAGCCTGTGAAGACCTTTCTTAGCCTACGTAAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCAGAGGCTCAGGGATGCCACTCTGACTCCACTTCGTACTCCTTTGTGTGGGGCTCAGCGCTTGGTGGCGACCCCCAGTGCGCTCTGGCGTTTGTCGGAGgtaggtcttcccatgaagcagctgctttgttccgtctttcacgaactctccctgcctcggttacttcactcctgcgaggggtgtgaaaggatggcaggat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG