Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|19788959|gb|BQ041018.1|BQ041018EST: GCATTACTGAACTTGGCGTCCCTTTGACCAAAGAACCAGGGTTTCACCAG TTCGATATTTTCGGCAACGCGCATGGCCTACTTGCGTCTCATCCATTGACT
genomic: GCATTACTGAACTTGGCGTCCCTTTGACCAAAGAACCAGGGTTTCACCAGgtgagatatc ... cccaatgcagTTCGATATTTTCGGCAACGCGCATGGCCTACTTGCGTCTCATCCATTGACT
EST:
gi|162174666|gb|FC351354.1|FC351354EST: GCATTACTGAACTTGGCGTCCCTTTGACCAAAGAACCAGGGTTTCACCAG TTCGATATTTTCGGCAACGCGCATGGCCTACTTGCGTCTCATCCATTGACT
genomic: GCATTACTGAACTTGGCGTCCCTTTGACCAAAGAACCAGGGTTTCACCAGgtgagatatc ... cccaatgcagTTCGATATTTTCGGCAACGCGCATGGCCTACTTGCGTCTCATCCATTGACT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTTAGAGCGATATCCTTCACTGGTTGGAAGTGACGATCGATTACATGCTTGCATTACTGAACTTGGCGTCCCTTTGACCAAAGAACCAGGGTTTCACCAGgtgagatatcttctcgtggctgagggtaatcgttgcacttgggttcctattatttatatgaagtggaaatcctcaggagccacattgtatctcacttaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC