1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...gtcaatgttagattattggatgtactagctttgcatgtaacacgtctatcacggtggtctgagtcacggaagaactgactgcggttcagtgtctttatagGTGGTCAACACAGGAGTTAGGGAGTTAGCGTGCTGTTGAGCGATTGAAAAAAGTCACCATGGCGAATTACTTGCTACACGGGACTATGCTTGTCACTATC
species | Physcomitrella patens |
transcript | PP1S94_26V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTGCCAGGCGGAGCATCGCAGCGTATTGGCTCGTTTTTCCTACGCAGCGG GTGGTCAACACAGGAGTTAGGGAGTTAGCGTGCTGTTGAGCGATTGAAAAAEST: gi|100451643|gb|CJ974869.1|CJ974869
genomic: CTGCCAGGCGGAGCATCGCAGCGTATTGGCTCGTTTTTCCTACGCAGCGGgtgcgtgatt ... gtctttatagGTGGTCAACACAGGAGTTAGGGAGTTAGCGTGCTGTTGAGCGATTGAAAAA
EST: CTGCCAGGCGGAGCATCGCAGCGTATTGGCTCGTTTTTCCTACGCAGCGG GTGGTCAACACAGGAGTTAGGGAGTTAGCGTGCTGTTGAGCGATTGAAAAAEST: gi|18360505|gb|BJ192568.1|BJ192568
genomic: CTGCCAGGCGGAGCATCGCAGCGTATTGGCTCGTTTTTCCTACGCAGCGGgtgcgtgatt ... gtctttatagGTGGTCAACACAGGAGTTAGGGAGTTAGCGTGCTGTTGAGCGATTGAAAAA
EST: CTGCCAGGCGGAGCATCGCAGCGTATTGGCTCGTTTTTCCTACGCAGCGG GTGGTCAACACAGGAGTTAGGGAGTTAGCGTGCTGTTGAGCGATTGAAAAA
genomic: CTGCCAGGCGGAGCATCGCAGCGTATTGGCTCGTTTTTCCTACGCAGCGGgtgcgtgatt ... gtctttatagGTGGTCAACACAGGAGTTAGGGAGTTAGCGTGCTGTTGAGCGATTGAAAAA
ctatcacggtggtctgagtcacggaagaactgactgcggttcagtgtctttatagGTGGTCAACACAGGAGTTAGGGAGTTAGCGTGCTGTTGAGCGATTGAAAAAAGTCACCATGGCGAATTACTTGCTACACGGGACTATGCTTGTCACTATC
aactgac putative branch site (score: 13)
tgtcttt putative PPT
tctttata TA-rich tract