1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...ttgatgctgagcatgtgttctccatacaagtcttggtactgagcagtctgtgccctgtagcgtgtggtggagtttagctgactgatacgatgttgcgcagGTCATAAGAGAATTATTCCCACTTGGAGGATGTTCTGGAACTTAATAAAGGGGTGACGAGGCGGCTTCAGTATTGAGAGTTGTTTTCTGACTGATCAAGT
species | Physcomitrella patens |
transcript | PP1S93_77V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGACATTGCCAG GTCATAAGAGAATTATTCCCACTTGGAGGATGTTCTGGAACTTAATAAAGGEST: gi|162184482|gb|FC359956.1|FC359956
genomic: AGACATTGCCAGgtgcgttggt ... tgttgcgcagGTCATAAGAGAATTATTCCCACTTGGAGGATGTTCTGGAACTTAATAAAGG
EST: CGTATCAAGAAAGGTGGCGAAGAATATTTTTTCGTTTTAGACATTGCCAG GTCATAAGAGAATTATTCCCACTTGGAGGATGTTCTGGAACTTAATAAAGGEST: gi|162255357|gb|FC432083.1|FC432083
genomic: CGTATCAAGAAAGGTGGCGAAGAATATTTTTTCGTTTTAGACATTGCCAGgtgcgttggt ... tgttgcgcagGTCATAAGAGAATTATTCCCACTTGGAGGATGTTCTGGAACTTAATAAAGG
EST: CGTATCAAGAAAGGTGGCGAAGAATATTTTTTCGTTTTAGACATTGCCAG GTCATAAGAGAATTATTCCCACTTGGAGGATGTTCTGGAACTTAATAAAGG
genomic: CGTATCAAGAAAGGTGGCGAAGAATATTTTTTCGTTTTAGACATTGCCAGgtgcgttggt ... tgttgcgcagGTCATAAGAGAATTATTCCCACTTGGAGGATGTTCTGGAACTTAATAAAGG
gtctgtgccctgtagcgtgtggtggagtttagctgactgatacgatgttgcgcagGTCATAAGAGAATTATTCCCACTTGGAGGATGTTCTGGAACTTAATAAAGGGGTGACGAGGCGGCTTCAGTATTGAGAGTTGTTTTCTGACTGATCAAGT
gactgat putative branch site (score: 6)