1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtcagacagaaattcatttgccctgttgctgtattattgtgcgcatacttaagtaatcataagcaagtaaatcaaggtgtctacagtttttacatacattttcataatactcgggacttttgcggtaattgacagttgtacttttttgcaacagGTTCACTTGCTTTTTAACAGGATTGACGTTAATAAAGGTGGATTACTTCGACAGACTGATTTTTCTAGCTATTGCGATGACAACCCTGATTTCCTACTAT
species | Physcomitrella patens |
transcript | PP1S93_57V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CATTGCATAGGAGTTTGCGTGTACTCATGCCATCAGTTTCAAAGCAACAG GTTCACTTGCTTTTTAACAGGATTGACGTTAATAAAGGTGGATTACTTCGA
genomic: CATTGCATAGGAGTTTGCGTGTACTCATGCCATCAGTTTCAAAGCAACAGgtcagacaga ... tttgcaacagGTTCACTTGCTTTTTAACAGGATTGACGTTAATAAAGGTGGATTACTTCGA
tttcataatactcgggacttttgcggtaattgacagttgtacttttttgcaacagGTTCACTTGCTTTTTAACAGGATTGACGTTAATAAAGGTGGATTACTTCGACAGACTGATTTTTCTAGCTATTGCGATGACAACCCTGATTTCCTACTAT
aattgac putative branch site (score: 3)
tactttttt putative PPT
tactttttt TA-rich tract