1 5' 3' | 2 5' 3' | 3 5' 3' |
gtcggttttagaaactcctgtgcctctttcaagcttttgacagtttttcagtttgagttgctgtgaagactcaatttctgtgactctatatgggggcgacaggcagcagctaacaaccgcattggtattatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGAGGAAGTGCTTCTTTGAATCACGGCTTATCGGCAAGTCCGTGGTTATGGT
species | Physcomitrella patens |
transcript | PP1S93_152V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACG TTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGAEST: gi|162267754|gb|FC443744.1|FC443744
genomic: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACGgtcggtttta ... tatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
EST: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACG TTGCANAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGAEST: gi|162267753|gb|FC443743.1|FC443743
genomic: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACGgtcggtttta ... tatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
EST: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACG TTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGAEST: gi|67693921|gb|BJ954154.1|BJ954154
genomic: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACGgtcggtttta ... tatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
EST: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACG TTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGAEST: gi|162212441|gb|FC388689.1|FC388689
genomic: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACGgtcggtttta ... tatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
EST: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACG TTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGAEST: gi|162261543|gb|FC437560.1|FC437560
genomic: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACGgtcggtttta ... tatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
EST: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACG TTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGAEST: gi|208373724|gb|DC952701.1|DC952701
genomic: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACGgtcggtttta ... tatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
EST: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACG TTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGAEST: gi|208353236|gb|DC926161.1|DC926161
genomic: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACGgtcggtttta ... tatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
EST: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACG TTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGAEST: gi|208360198|gb|DC950199.1|DC950199
genomic: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACGgtcggtttta ... tatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
EST: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACG TTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGAEST: gi|208369687|gb|DC936393.1|DC936393
genomic: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACGgtcggtttta ... tatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
EST: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACG TTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAACAGGCGAEST: gi|162261542|gb|FC437559.1|FC437559
genomic: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACGgtcggtttta ... tatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
EST: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACG TTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
genomic: GCGCTACCGCGTGCTTCTTCTCGACCATGAACGTCACACTGAAACATACGgtcggtttta ... tatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGA
ctctatatgggggcgacaggcagcagctaacaaccgcattggtattatcgtgcagTTGCAAAAGCTCTCACCAAAGCGGTGCCTAACATCACAGCTGAGCAGGCGAGGAAGTGCTTCTTTGAATCACGGCTTATCGGCAAGTCCGTGGTTATGGT
agctaac putative branch site (score: 18)
tattat TA-rich tract