1 5' 3' | 2 5' 3' | 3 5' 3' |
...tatccgagatctgttgttcccctggttgtgtcaatatttgtggtggaatcaaatattcaatcgcaattggtatctctttgatcaatgtcttggggaacagATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTATAGTGAATATTGTGCCCCTCTGACTTCGTTTGATTGGAACGAGGCTGAGC
species | Physcomitrella patens |
transcript | PP1S92_5V6.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAG ATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTATEST: gi|162279547|gb|FC455325.1|FC455325
genomic: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAGgtgtgttgtc ... tggggaacagATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTAT
EST: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAG ATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTATEST: gi|67569631|gb|BJ942455.1|BJ942455
genomic: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAGgtgtgttgtc ... tggggaacagATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTAT
EST: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAG ATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTATEST: gi|100396667|gb|BY990239.1|BY990239
genomic: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAGgtgtgttgtc ... tggggaacagATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTAT
EST: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAG ATCCATGATGACAAGGTGGAATCTAANAGTCTACTCAACAACAACAAGTATEST: gi|208348375|gb|DC905561.1|DC905561
genomic: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAGgtgtgttgtc ... tggggaacagATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTAT
EST: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAG ATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTATEST: gi|100406333|gb|BY955575.1|BY955575
genomic: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAGgtgtgttgtc ... tggggaacagATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTAT
EST: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAG ATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTAT
genomic: AAAAACCCGACTTGCTGGCTACCACGGGCGACTATCTTCGCATATGGCAGgtgtgttgtc ... tggggaacagATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTAT
gaatcaaatattcaatcgcaattggtatctctttgatcaatgtcttggggaacagATCCATGATGACAAGGTGGAATCTAAAAGTCTACTCAACAACAACAAGTATAGTGAATATTGTGCCCCTCTGACTTCGTTTGATTGGAACGAGGCTGAGC
ctttgat putative branch site (score: 5)
aaatattcaat TA-rich tract