1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
...gtatcttatttttttaagtgcggcttcaattccatgtatcattctgtgctctaatctgtaagccctttttgtaaccttgtactatttcttcaacttgcagGGATGATACTTTTGCAGACATTCACAATTTGGACCACTGCATTAAGTATCTCAACCAGTCTTTAGTTACATTTGGCTTTCCATCAGGACTAGATCTTTAC
species | Physcomitrella patens |
transcript | PP1S91_39V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GGTTTATATGATTCTAGCGACGTGTTTGG GGATGATACTTTTGCAGACATTCACAATTTGGACCACTGCATTAAGTATCTEST: gi|18359144|gb|BJ191204.1|BJ191204
genomic: GGTTTATATGATTCTAGCGACGTGTTTGGgtaaacttcg ... caacttgcagGGATGATACTTTTGCAGACATTCACAATTTGGACCACTGCATTAAGTATCT
EST: GGTTTATATGATTCTAGCGACGTGTTTGG GGATGATACTTTTGCAGACATTCACAATTTGGACCACTGCATTAAGTATCT
genomic: GGTTTATATGATTCTAGCGACGTGTTTGGgtaaacttcg ... caacttgcagGGATGATACTTTTGCAGACATTCACAATTTGGACCACTGCATTAAGTATCT
gtgctctaatctgtaagccctttttgtaaccttgtactatttcttcaacttgcagGGATGATACTTTTGCAGACATTCACAATTTGGACCACTGCATTAAGTATCTCAACCAGTCTTTAGTTACATTTGGCTTTCCATCAGGACTAGATCTTTAC
ttgtaac putative branch site (score: 2)
ctatttcttc putative PPT
tttttgtaa TA-rich tract